Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04607 and BL02585
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence dna-align/BSNT_04607___yugT.1.5803.seq
# -bsequence dna-align/BL02585___yugT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04607___yugT-BL02585___yugT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04607___yugT-BL02585___yugT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04607___yugT
# 2: BL02585___yugT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1796
# Identity: 1197/1796 (66.6%)
# Similarity: 1197/1796 (66.6%)
# Gaps: 244/1796 (13.6%)
# Score: 3768.5
#
#
#=======================================
BSNT_04607___ 1 ATGAAAAAGGCTTGGTGGAAGGAAGCCGTTGTTTACCAAATTTACCCCCG 50
|||..||.|||.||||||||.||.||.||.|||||.|||.|.||.||.||
BL02585___yug 1 ATGGCAAGGGCATGGTGGAAAGAGGCAGTCGTTTATCAAGTGTATCCGCG 50
BSNT_04607___ 51 CAGTTTTAAAGATTCAAATGGCGACGGAATTGGGGATATTCAA-GGAATC 99
||||||||..|||||.||.||.||.||..|.||.|||| |||| ||.|||
BL02585___yug 51 CAGTTTTATGGATTCGAACGGGGATGGCGTCGGAGATA-TCAACGGGATC 99
BSNT_04607___ 100 AGATCCAAGCTTTCTTACATAAAAGAGCTGGGCGCTGACGTCATATGGAT 149
|||...||||||.|.||.||.|..|||||.||.||.||.|.|||.|||||
BL02585___yug 100 AGAGAGAAGCTTCCGTATATCAGGGAGCTCGGGGCAGATGCCATTTGGAT 149
BSNT_04607___ 150 TTGCCCACTGTATGACTCACCGAATGCTGATAATGGCTATGATATCCGGG 199
|||.||..|.|.|||.||.||.|||||.|||||.|||||.||.|||.|||
BL02585___yug 150 TTGTCCGGTCTTTGATTCTCCCAATGCAGATAACGGCTACGACATCAGGG 199
BSNT_04607___ 200 ATTATCAAAACAT-ATTAAGC--GAGTTTGGCACCATGGAAGATTTTGAT 246
|||||||||.||| || || ||.||||||||.|||||.||.|||||.
BL02585___yug 200 ATTATCAAAGCATCAT---GCCGGAATTTGGCACGATGGACGACTTTGAC 246
BSNT_04607___ 247 GAACTGCTTGGTGACATT----------CATGATCTGGGGATGAAGCTGA 286
||||| ||| |||.|.||.||.|||||.||||
BL02585___yug 247 GAACT----------ATTAACTGAAGCGCATCAGCTCGGAATGAAACTGA 286
BSNT_04607___ 287 TTATGGATCTCGTTGTGAACCACACAAGCGACGAACATCCATGGTTCATA 336
|.||.|||||.||..|.||.||.||.|||||.||||||||.|||||.||.
BL02585___yug 287 TCATCGATCTTGTCATCAATCATACGAGCGATGAACATCCTTGGTTTATC 336
BSNT_04607___ 337 GAATCCCGTTCA---------TCCATACACTCGGAAAAGCGCGACTGGTA 377
|||||..|..|| || |||.||| ||.||||||||
BL02585___yug 337 GAATCAAGAGCAGAGCGGAATTC--------CGGGAAA-CGGGACTGGTA 377
BSNT_04607___ 378 TATTTGGAAAGACGGCAAAAACGGAAAAGCG--CCCAACAATTGGGAAAG 425
|||||||.|.|||||.||..|||| ||||| ||.|||||.||||||||
BL02585___yug 378 TATTTGGCATGACGGAAAGGACGG--AAGCGAACCGAACAACTGGGAAAG 425
BSNT_04607___ 426 CATTTTCGGCGGACCGGCTTGGGAGTATGATCAAGAGACA-AGCCAGTAT 474
|||.||||||||..|.||.|||...|||||..||.|.||| || ||.|||
BL02585___yug 426 CATATTCGGCGGCTCAGCCTGGACTTATGACGAAAAAACAGAG-CAATAT 474
BSNT_04607___ 475 TATCTGCACCTTTTTGATAAAAAACAGCCTGATTTGAATTGGGAAAATGA 524
|||||||||||||||.|..||||.|||||||||.||||||||||| |
BL02585___yug 475 TATCTGCACCTTTTTCACGAAAAGCAGCCTGATCTGAATTGGGAA----A 520
BSNT_04607___ 525 ACAGGTGAGGAATGC----CG---TTTATGACATGATCAATTGGTGGCTT 567
||| |||| .|||| || ||||||||||||||||.|||||||||
BL02585___yug 521 ACA-GTGA--TATGCGAAGCGCTCTTTATGACATGATCAACTGGTGGCTT 567
BSNT_04607___ 568 GATAAAGGAATTGACGGATTTCGGGTGGATGCCATTACGCATATTAAGAA 617
.|.||||||||.||||||||..||||.||.||.|||.||||.||||||||
BL02585___yug 568 CAAAAAGGAATCGACGGATTCAGGGTTGACGCGATTTCGCACATTAAGAA 617
BSNT_04607___ 618 AAAAGAAGGGCTTCCCGACATGCCGAATCCAAAGGGGCTGGACTAT-GTC 666
||||||||||||.||.||..||||||||||..|.|||| |..||.| ||.
BL02585___yug 618 AAAAGAAGGGCTGCCGGATCTGCCGAATCCGGAAGGGC-GCCCTTTCGTG 666
BSNT_04607___ 667 CCTTCCTTTCCTTATCATATGAATGCTGACGGCATTATGGATTTGTTAAC 716
|||||.|||.|||||||||||||||..||.||.|||||||..||.|| .|
BL02585___yug 667 CCTTCATTTGCTTATCATATGAATGTCGAAGGGATTATGGCGTTATT-GC 715
BSNT_04607___ 717 AGAGCTG--AAGGAAAACACATTTTCCCGCTATCC---GATTATGACAGT 761
|| |.|| ||.||.||.||.||..||.|.||||| .||.||||||||
BL02585___yug 716 AG-GATGTAAAAGAGAATACGTTCGCCGGGTATCCACATATCATGACAGT 764
BSNT_04607___ 762 TGGTGAAGCAAACGGCGT---CGCTGCAAAAGAAGCAGCTGATTGGGCTG 808
.||.|||||||||||.|| ||||| |||||||.|..||.||||.||
BL02585___yug 765 CGGCGAAGCAAACGGTGTCAGCGCTG---AAGAAGCGGAGGACTGGGTTG 811
BSNT_04607___ 809 GAGAAAAAAACGGCATATTCAGCATGATTTTTCAATTTGAGCATCTCGGC 858
|||||..||||||.||||||||||||||||||||||||||.||.|||||.
BL02585___yug 812 GAGAACCAAACGGTATATTCAGCATGATTTTTCAATTTGAACACCTCGGG 861
BSNT_04607___ 859 CTGTGGGATGTAGAGATCAATGAA-----AGTA-TTGATATCGTTGCATT 902
||.|||||| |.|||| ||.| ..||||||...|.|.|
BL02585___yug 862 CTTTGGGAT---------ATTGAAGGCGGAGAACCCGATATCCCCGAACT 902
BSNT_04607___ 903 TAAACGAATTTTAACTGACTGGCAGGACAGTCTG-----GAAGGGATCGG 947
.||.||.|||||..|..||||| ||.|||| |||||.|..||
BL02585___yug 903 CAAGCGGATTTTGTCAAACTGG-----CAATCTGCTCTTGAAGGAAAAGG 947
BSNT_04607___ 948 CTGGAATGCTTTGTTTATGGAGAATCACGACCAGCCTCGTTCAGTTTCTG 997
||||||.||..|.|||||.||.|||||.||.|||||.||..|.|||||.|
BL02585___yug 948 CTGGAACGCGCTTTTTATCGAAAATCATGATCAGCCCCGGGCCGTTTCAG 997
BSNT_04607___ 998 TGTGGGGAGACGACGGAGTGTACCTGAA----AGAA-----AGTGCAAAA 1038
|.||||||||.||||| ||| |||| ||.||.||.
BL02585___yug 998 TTTGGGGAGATGACGG---------GAAATACAGAACAGTCAGCGCGAAG 1038
BSNT_04607___ 1039 GCGCTTTCCGCTG---TTTATTTTCTCATGAAAGGCACACCGTTTATTTA 1085
|| ||| .|||| |.||||||.|.|||||||||||.|||||||||||
BL02585___yug 1039 GC-CTT--AGCTGCAATGTATTTTTTGATGAAAGGCACCCCGTTTATTTA 1085
BSNT_04607___ 1086 TCAGGGACAGGAACTCGGGATGACGAACGTGGCTTTTC-CATCTATTGAG 1134
|||.||.||||||.||||.|||||.|||| .|.||||| .|..|||.||.
BL02585___yug 1086 TCAAGGGCAGGAAATCGGAATGACAAACG-CGATTTTCTTAGATATAGAC 1134
BSNT_04607___ 1135 GACTATGATGATGTCGCGATGAAA---------CGCCTGTATGAAACAAA 1175
||.||||||||.|||.||||.||| || ||..||||
BL02585___yug 1135 GATTATGATGACGTCTCGATTAAAAATTATTACCG-------GATTCAAA 1177
BSNT_04607___ 1176 AACAGCGAAA--GGCACATCACACGAGGATGTGATGAAGATTGTCTGGAA 1223
|| |||| |||...||||||||.||..|.||||||...||.|||||
BL02585___yug 1178 AA----GAAAAGGGCCGCTCACACGAAGACATCATGAAGGCGGTATGGAA 1223
BSNT_04607___ 1224 AAAGGGAAGAGACAATTCGCGAACGCCGATGCAATGGAATGCTGGTCCAT 1273
||||.|.||.||..|..||||.|||||.||||||||||.||.|.|.|||.
BL02585___yug 1224 AAAGAGCAGGGATCACGCGCGCACGCCTATGCAATGGACTGATCGGCCAA 1273
BSNT_04607___ 1274 ACGCCGGATTTTCTGAGGCCAAACCGTGGATCGGAATCAATGACAATTAC 1323
|.|||||.|||.|..|.|...||||||||.|..|.||.||.||.||||||
BL02585___yug 1274 ATGCCGGCTTTACCAAAGGGGAACCGTGGCTGCGCATGAACGAAAATTAC 1323
BSNT_04607___ 1324 AAATGGCTG---AATGCCG------AGGCGCAAAAAAACGATAAAAC--- 1361
|| |||| ||||.|| ||..|| ||.|..|
BL02585___yug 1324 AA---GCTGATCAATGTCGTTCATCAGCAGC---------ATGACCCCCG 1361
BSNT_04607___ 1362 ATCCGTTTACCATTTTTACAAAAGCTTGAT--CAAGCTGCGCCAAAC-AT 1408
.||.||.||.||||||||.|||.|.||.|| |||.|.| .|||| .|
BL02585___yug 1362 GTCGGTCTATCATTTTTATAAACGGTTAATCGCAATCAG---AAAACGGT 1408
BSNT_04607___ 1409 ATGATGTTTTTATTAACGGGACATACGAGCTCATTTTACCGGAAGATCAG 1458
||||.||.||.||..||||..||||..|.||..||.|..|.||.||||.|
BL02585___yug 1409 ATGACGTCTTCATCGACGGATCATATAAACTGCTTCTGGCTGAGGATCGG 1458
BSNT_04607___ 1459 CAAATCTTTGCATATCTTCGGAAA-----AACGAGA----GCCATACTGC 1499
||.||.|||||||| |||..|||| ||..||| |||||
BL02585___yug 1459 CAGATTTTTGCATA-CTTGCGAAAGCTTGAAGAAGAAACCGCCAT----- 1502
BSNT_04607___ 1500 AC-TGATTGCGGCCAATCTGACAG-GAACACC-GGCGTTGTTCAGGCACT 1546
| ||||.|.| ||.|| ||| |.||.|| ||||||.|.|...||..
BL02585___yug 1503 -CGTGATCGTG---AACCT--CAGCGCACGCCAGGCGTTTTACCATCATC 1546
BSNT_04607___ 1547 CTGGATTGCCATTGTCATCAGATGCACTCGTCTTGTCAAATATTGA-AAC 1595
|.|.||..||.||.|..||..|.|.|||..|..|||||||..|.|| |.|
BL02585___yug 1547 CCGCATATCCGTTATGTTCGAACGGACTGCTGCTGTCAAACTTGGATATC 1596
BSNT_04607___ 1596 AGAGCCGCACAAGCATATGACATC----------AGTACTCT-TAAAGC- 1633
| |..||||||||||..|.||||| || ||.|| |.|.||
BL02585___yug 1597 A-ACGCGCACAAGCACCTCACATCTTTCATGATGAG-ACCCTATGAGGCG 1644
BSNT_04607___ 1634 --CGT-------ATGAAGCAAGAATATATC-----TATGGTGCTAA 1665
||| ||.|..||.||| ||| |.|| |||
BL02585___yug 1645 CGCGTTTATTTGATCAGACAGGAA---ATCGGCGATTTG----TAA 1683
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