Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_04607 and BL02585

See DNA alignment / Visit BSNT_04607 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence pep-align/BSNT_04607___yugT.1.5803.seq
#    -bsequence pep-align/BL02585___yugT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04607___yugT-BL02585___yugT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04607___yugT-BL02585___yugT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04607___yugT
# 2: BL02585___yugT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity:     382/561 (68.1%)
# Similarity:   458/561 (81.6%)
# Gaps:           8/561 ( 1.4%)
# Score: 2162.0
# 
#
#=======================================

BSNT_04607___      1 MKKAWWKEAVVYQIYPRSFKDSNGDGIGDIQGIRSKLSYIKELGADVIWI     50
                     |.:||||||||||:|||||.||||||:|||.|||.||.||:|||||.|||
BL02585___yug      1 MARAWWKEAVVYQVYPRSFMDSNGDGVGDINGIREKLPYIRELGADAIWI     50

BSNT_04607___     51 CPLYDSPNADNGYDIRDYQNILSEFGTMEDFDELLGDIHDLGMKLIMDLV    100
                     ||::|||||||||||||||:|:.|||||:||||||.:.|.||||||:|||
BL02585___yug     51 CPVFDSPNADNGYDIRDYQSIMPEFGTMDDFDELLTEAHQLGMKLIIDLV    100

BSNT_04607___    101 VNHTSDEHPWFIESRSSIHSEKRDWYIWKDGKNGKAPNNWESIFGGPAWE    150
                     :||||||||||||||:..:|.|||||||.|||:|..||||||||||.||.
BL02585___yug    101 INHTSDEHPWFIESRAERNSGKRDWYIWHDGKDGSEPNNWESIFGGSAWT    150

BSNT_04607___    151 YDQETSQYYLHLFDKKQPDLNWENEQVRNAVYDMINWWLDKGIDGFRVDA    200
                     ||::|.|||||||.:|||||||||..:|:|:||||||||.||||||||||
BL02585___yug    151 YDEKTEQYYLHLFHEKQPDLNWENSDMRSALYDMINWWLQKGIDGFRVDA    200

BSNT_04607___    201 ITHIKKKEGLPDMPNPKGLDYVPSFPYHMNADGIMDLLTELKENTFSRYP    250
                     |:||||||||||:|||:|..:||||.||||.:|||.||.::|||||:.||
BL02585___yug    201 ISHIKKKEGLPDLPNPEGRPFVPSFAYHMNVEGIMALLQDVKENTFAGYP    250

BSNT_04607___    251 -IMTVGEANGVAAKEAADWAGEKNGIFSMIFQFEHLGLWDVEINESIDIV    299
                      ||||||||||:|:||.||.||.|||||||||||||||||:|..|. ||.
BL02585___yug    251 HIMTVGEANGVSAEEAEDWVGEPNGIFSMIFQFEHLGLWDIEGGEP-DIP    299

BSNT_04607___    300 AFKRILTDWQDSLEGIGWNALFMENHDQPRSVSVWGDDGVYLKESAKALS    349
                     ..||||::||.:|||.||||||:|||||||:||||||||.|...|||||:
BL02585___yug    300 ELKRILSNWQSALEGKGWNALFIENHDQPRAVSVWGDDGKYRTVSAKALA    349

BSNT_04607___    350 AVYFLMKGTPFIYQGQELGMTNVAFPSIEDYDDVAMKRLYETKTAKGTSH    399
                     |:|||||||||||||||:||||..|..|:|||||::|..|..:..||.||
BL02585___yug    350 AMYFLMKGTPFIYQGQEIGMTNAIFLDIDDYDDVSIKNYYRIQKEKGRSH    399

BSNT_04607___    400 EDVMKIVWKKGRDNSRTPMQWNAGPYAGFSEAKPWIGINDNYKWLNAEAQ    449
                     ||:||.||||.||::||||||...|.|||::.:||:.:|:|||.:|...|
BL02585___yug    400 EDIMKAVWKKSRDHARTPMQWTDRPNAGFTKGEPWLRMNENYKLINVVHQ    449

BSNT_04607___    450 KNDKTSVYHFYKSLIKLRQTYDVFINGTYELILPEDQQIFAYLRKNESHT    499
                     ::|..|||||||.||.:|:.|||||:|:|:|:|.||:||||||||.|..|
BL02585___yug    450 QHDPRSVYHFYKRLIAIRKRYDVFIDGSYKLLLAEDRQIFAYLRKLEEET    499

BSNT_04607___    500 ALIAANLTGTPALFRHSGLPLSSDALVLSNIETEPHKHMTSVLLKPYEAR    549
                     |::..||:...|.:.|...||.|:.|:|||::...|||:||.:::|||||
BL02585___yug    500 AIVIVNLSARQAFYHHPAYPLCSNGLLLSNLDINAHKHLTSFMMRPYEAR    549

BSNT_04607___    550 IYLWC------    554
                     :||..      
BL02585___yug    550 VYLIRQEIGDL    560


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04607 and BL02585

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
