Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05429 and BL03297
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05429.1.5803.seq
# -bsequence dna-align/BL03297.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05429-BL03297.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05429-BL03297.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05429
# 2: BL03297
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 301/357 (84.3%)
# Similarity: 301/357 (84.3%)
# Gaps: 36/357 (10.1%)
# Score: 1425.0
#
#
#=======================================
BSNT_05429 1 TTGGAATTTGTCGATAAAAAGGGAGAGGTGAAGAAGATGAAAAAACTCAT 50
||||||||||||||
BL03297 1 ------------------------------------ATGAAAAAACTCAT 14
BSNT_05429 51 AGTTCTGACATTATCAATGCTGCTTTTGTTGTCAGCTTGCGGCACTTCGG 100
||||||.|||||||||||||||||||||||||||||.|||||||||||||
BL03297 15 AGTTCTAACATTATCAATGCTGCTTTTGTTGTCAGCCTGCGGCACTTCGG 64
BSNT_05429 101 GCCAATCGGAGGACAAGTTAAGCTCAGGCAATAAAAATGCAGCATCTGAA 150
||||||||||||||||||.||||||||.||||||||||||.||.||||||
BL03297 65 GCCAATCGGAGGACAAGTCAAGCTCAGACAATAAAAATGCGGCCTCTGAA 114
BSNT_05429 151 GAAACCATCACTAAAGAAGGTTCATTCGCGGGGTTGGCTGACAGCCATAC 200
||||||.||||||||||||||||||||||||||||||||||||||||.||
BL03297 115 GAAACCGTCACTAAAGAAGGTTCATTCGCGGGGTTGGCTGACAGCCACAC 164
BSNT_05429 201 AATTGCGGTGAACATCGATGGCAAAGAAACAACGCTTCAAATTGATGAAG 250
|||||||||||||||.||.|||||||||||||||||||||.|.|||||||
BL03297 165 AATTGCGGTGAACATTGACGGCAAAGAAACAACGCTTCAAGTCGATGAAG 214
BSNT_05429 251 ATCTTCAGGAAAAAGTCAATTCCATTGAAGAGGGCAAAAAAGTCGAAGTC 300
||||||||||.||||||||||||||||||||.||||||||||||||||||
BL03297 215 ATCTTCAGGACAAAGTCAATTCCATTGAAGAAGGCAAAAAAGTCGAAGTC 264
BSNT_05429 301 CAATATACAAAAGTCGAGAATGGCGTCTTGGAGCTGAAAAGCATCGAAAT 350
|||||||||||||..||.||||||||.||||||||||||||||||||||.
BL03297 265 CAATATACAAAAGGTGAAAATGGCGTTTTGGAGCTGAAAAGCATCGAAAC 314
BSNT_05429 351 CAAATAA 357
.||||||
BL03297 315 AAAATAA 321
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