Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05429 and BL03297

See DNA alignment / Visit BSNT_05429 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05429.1.5803.seq
#    -bsequence pep-align/BL03297.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05429-BL03297.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05429-BL03297.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05429
# 2: BL03297
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:      99/118 (83.9%)
# Similarity:   102/118 (86.4%)
# Gaps:          12/118 (10.2%)
# Score: 483.0
# 
#
#=======================================

BSNT_05429         1 MEFVDKKGEVKKMKKLIVLTLSMLLLLSACGTSGQSEDKLSSGNKNAASE     50
                                 |||||||||||||||||||||||||||.||.|||||||
BL03297            1 ------------MKKLIVLTLSMLLLLSACGTSGQSEDKSSSDNKNAASE     38

BSNT_05429        51 ETITKEGSFAGLADSHTIAVNIDGKETTLQIDEDLQEKVNSIEEGKKVEV    100
                     ||:|||||||||||||||||||||||||||:|||||:|||||||||||||
BL03297           39 ETVTKEGSFAGLADSHTIAVNIDGKETTLQVDEDLQDKVNSIEEGKKVEV     88

BSNT_05429       101 QYTKVENGVLELKSIEIK    118
                     ||||.|||||||||||.|
BL03297           89 QYTKGENGVLELKSIETK    106


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.