Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05741 and BL03961
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence dna-align/BSNT_05741___ywhB.1.5803.seq
# -bsequence dna-align/BL03961___ywhB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05741___ywhB-BL03961___ywhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05741___ywhB-BL03961___ywhB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05741___ywhB
# 2: BL03961___ywhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 144/189 (76.2%)
# Similarity: 144/189 (76.2%)
# Gaps: 3/189 ( 1.6%)
# Score: 552.0
#
#
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BSNT_05741___ 1 ATGCCATACGTAACTGTCAAAATGCTCGAAGGCCGTACAGACGAGCAAAA 50
|||||||||||||||||..|||||||.||||||||.|||||.||.|||||
BL03961___ywh 1 ATGCCATACGTAACTGTTCAAATGCTGGAAGGCCGCACAGATGAACAAAA 50
BSNT_05741___ 51 ACGCAATCTTGTCGAGAAAGTAACAGAAGCCGTAAAGGAAACAACCGGTG 100
|.|.|||||.||..|.|||||.||.||||||||....||||||||.||.|
BL03961___ywh 51 AAGAAATCTCGTTAAAAAAGTGACCGAAGCCGTCTCCGAAACAACAGGCG 100
BSNT_05741___ 101 CTTCTGAAGAAAAAATTGTTGTCTTTATAGAAGAAATGAGAAAAGACCAT 150
|..|||.|||||||||.|..|||.|.||.||.|||||||.|||.||..|.
BL03961___ywh 101 CACCTGCAGAAAAAATCGCGGTCATCATTGAGGAAATGAAAAAGGAAAAC 150
BSNT_05741___ 151 TATGCCGTCGCAGGCAAACGCCTGAGCGATATGGAATAA 189
||.|..|||||.||||||||..|||||||||||.||
BL03961___ywh 151 TACGGTGTCGCCGGCAAACGAATGAGCGATATGTAA--- 186
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