Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05741 and BL03961

See DNA alignment / Visit BSNT_05741 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05741___ywhB.1.5803.seq
#    -bsequence pep-align/BL03961___ywhB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05741___ywhB-BL03961___ywhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05741___ywhB-BL03961___ywhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05741___ywhB
# 2: BL03961___ywhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 62
# Identity:      49/62 (79.0%)
# Similarity:    55/62 (88.7%)
# Gaps:           1/62 ( 1.6%)
# Score: 249.0
# 
#
#=======================================

BSNT_05741___      1 MPYVTVKMLEGRTDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDH     50
                     ||||||:||||||||||||||:||||||.|||||..|||.|.||||:|::
BL03961___ywh      1 MPYVTVQMLEGRTDEQKRNLVKKVTEAVSETTGAPAEKIAVIIEEMKKEN     50

BSNT_05741___     51 YAVAGKRLSDME     62
                     |.|||||:||| 
BL03961___ywh     51 YGVAGKRMSDM-     61


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