Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05631 and BL03993

See Amino acid alignment / Visit BSNT_05631 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:44
# Commandline: needle
#    -asequence dna-align/BSNT_05631___atpI.1.5803.seq
#    -bsequence dna-align/BL03993___atpI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05631___atpI-BL03993___atpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05631___atpI-BL03993___atpI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05631___atpI
# 2: BL03993___atpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity:     282/391 (72.1%)
# Similarity:   282/391 (72.1%)
# Gaps:          14/391 ( 3.6%)
# Score: 947.0
# 
#
#=======================================

BSNT_05631___      1 ATGGACGATCCCAAGCTTACATTTAGCAGACAACGCAAATATTTATTGTT     50
                     |||..||||.|.|..|||.||||..|.||.||||..||||||.|..|.|.
BL03993___atp      1 ATGACCGATGCGAGTCTTTCATTCCGTAGGCAACAAAAATATGTCCTATA     50

BSNT_05631___     51 CATTTTGGCAGTGTATGTACTGGGTTATGG-TTTAACAG-CGTATAAAAC     98
                     .|||||.|||||.|..||..|.||.||||| |||  |.| |.|||.|..|
BL03993___atp     51 TATTTTAGCAGTCTGCGTGTTAGGCTATGGATTT--CTGCCATATCAGGC     98

BSNT_05631___     99 CGTTTTTTTAGGCCTTATTCTGGGAACTGTTTTCAGTTTGTTTAATTTTT    148
                     ..|||||||||||||.|||...||.|||||||||||.|..||.|||.|.|
BL03993___atp     99 AATTTTTTTAGGCCTGATTACCGGCACTGTTTTCAGCTATTTCAATCTCT    148

BSNT_05631___    149 TACTGCTCGTCAGAAGAATGAATGCTTTTGACAGAGCTGTTGAGAAAGG-    197
                     ..|||||.|.||.|||.|||.|.||.||.||.|.|||.| ||..||||| 
BL03993___atp    149 GGCTGCTGGCCAAAAGGATGCAGGCCTTCGATAAAGCAG-TGGCAAAGGG    197

BSNT_05631___    198 -AAAGTCCATACGATCTCTCGGGAGCGCAGCGCGGTGGTGCAATGCGATT    246
                      |||.| .||.||.||||||||||..||..|..|.|.||||||.||.|||
BL03993___atp    198 CAAAAT-GATCCGTTCTCTCGGGACTGCTTCCAGATTGTGCAACGCCATT    246

BSNT_05631___    247 CTTGCTGTGGCTGTTGCCTATAAAAATCCCGAATACTTTCATATGGCAAG    296
                     .|.||.|.|||..||||.||||||.|.||.|||||..|||||.|||||.|
BL03993___atp    247 ATCGCGGCGGCCATTGCTTATAAATACCCTGAATATATTCATTTGGCAGG    296

BSNT_05631___    297 TACAGTTATT---GGATTAATGACAATATACCCTGTCATTATGATAGATT    343
                        .||.|||   ||.||.||||||||.||.|||||||||||||||||||
BL03993___atp    297 ---CGTCATTGTGGGGTTGATGACAATTTATCCTGTCATTATGATAGATT    343

BSNT_05631___    344 CCTTTATCCAGCTTAAACGTTCATCAATGGAAGAGAGGTGA    384
                     |||||||||||||.|||||||||||||||||||||||||||
BL03993___atp    344 CCTTTATCCAGCTAAAACGTTCATCAATGGAAGAGAGGTGA    384


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