Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05631 and BL03993

See DNA alignment / Visit BSNT_05631 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:44
# Commandline: needle
#    -asequence pep-align/BSNT_05631___atpI.1.5803.seq
#    -bsequence pep-align/BL03993___atpI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05631___atpI-BL03993___atpI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05631___atpI-BL03993___atpI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05631___atpI
# 2: BL03993___atpI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      89/127 (70.1%)
# Similarity:   104/127 (81.9%)
# Gaps:           0/127 ( 0.0%)
# Score: 460.0
# 
#
#=======================================

BSNT_05631___      1 MDDPKLTFSRQRKYLLFILAVYVLGYGLTAYKTVFLGLILGTVFSLFNFL     50
                     |.|..|:|.||:||:|:||||.|||||...|:.:|||||.|||||.||..
BL03993___atp      1 MTDASLSFRRQQKYVLYILAVCVLGYGFLPYQAIFLGLITGTVFSYFNLW     50

BSNT_05631___     51 LLVRRMNAFDRAVEKGKSIRSLGSAARWCNAILAVAVAYKNPEYFHMAST    100
                     ||.:||.|||:||.|||.|||||:|:|.||||:|.|:|||.|||.|:|..
BL03993___atp     51 LLAKRMQAFDKAVAKGKMIRSLGTASRLCNAIIAAAIAYKYPEYIHLAGV    100

BSNT_05631___    101 VIGLMTIYPVIMIDSFIQLKRSSMEER    127
                     ::|||||||||||||||||||||||||
BL03993___atp    101 IVGLMTIYPVIMIDSFIQLKRSSMEER    127


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.