Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00001 and BPUM_0001
See
Amino acid alignment /
Visit
BSNT_00001 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:56
# Commandline: needle
# -asequence dna-align/BSNT_00001___dnaA.1.24716.seq
# -bsequence dna-align/BPUM_0001___dnaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00001___dnaA-BPUM_0001___dnaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00001___dnaA-BPUM_0001___dnaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00001___dnaA
# 2: BPUM_0001___dnaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1345
# Identity: 1091/1345 (81.1%)
# Similarity: 1091/1345 (81.1%)
# Gaps: 8/1345 ( 0.6%)
# Score: 4410.0
#
#
#=======================================
BSNT_00001___ 1 ATGGAAAATATATTAGACCTGTGGAACCAAGCCCTTGCTCAAATCGAAAA 50
|||||||||||.||.||.||||||||..||||.|||....||||.||.|.
BPUM_0001___d 1 ATGGAAAATATTTTGGATCTGTGGAATAAAGCACTTCAAAAAATAGAGAC 50
BSNT_00001___ 51 AAAGTTGAGCAAACCGAGTTTTGAGACTTGGATGAAGTCAACCAAAGCCC 100
|||||||||||||||.|||||||||||.||||||||.||.||.|||||||
BPUM_0001___d 51 AAAGTTGAGCAAACCTAGTTTTGAGACATGGATGAAATCGACAAAAGCCC 100
BSNT_00001___ 101 ACTCACTGCAAGGCGATACATTAACGATCACGGCTCCCAATGAATTTGCC 150
|.||.||.|||||.|||||..|.||.||.|||||.||.|||||||||||.
BPUM_0001___d 101 ATTCTCTTCAAGGTGATACGCTCACAATTACGGCACCTAATGAATTTGCT 150
BSNT_00001___ 151 AGAGACTGGCTGGAGTCCAGATACTTGCATCTGATTGCAGATACTATATA 200
|||||||||.||||.||.|||||..|.||..|.|||||.|||||.||.||
BPUM_0001___d 151 AGAGACTGGTTGGAATCAAGATATCTCCACTTAATTGCTGATACCATCTA 200
BSNT_00001___ 201 TGAATTAACCGGGGAAGAATTGAGCATTAAGTTTGTCATTCCTCAAAATC 250
.|||.|.||.||.|||||..|.||||||||.|||.|.|||||||||||||
BPUM_0001___d 201 CGAACTGACAGGTGAAGAGCTCAGCATTAAATTTATTATTCCTCAAAATC 250
BSNT_00001___ 251 AAGATGTTGAGGACTTTATGCCGAAA--CCGCAAGTCAAAAAAGCGGTC- 297
|.||||..|.|||...|||||| ||| |..|||.| ||||||..|||
BPUM_0001___d 251 AGGATGAAGTGGAAGCTATGCC-AAAGTCTCCAATT--AAAAAGATGTCT 297
BSNT_00001___ 298 AAAGAAGAT-ACATCTGATTTTCCTCAAAATATGCTCAATCCAAAATATA 346
||||||||| .|.|| |||.||||.|||||||||||.|||||||||||||
BPUM_0001___d 298 AAAGAAGATCCCGTC-GATATTCCACAAAATATGCTGAATCCAAAATATA 346
BSNT_00001___ 347 CTTTTGATACTTTTGTCATCGGATCTGGAAACCGATTTGCACACGCTGCT 396
|.||||||||||||||.||.||.||.||.|||||||||||.||.||.|||
BPUM_0001___d 347 CATTTGATACTTTTGTTATTGGTTCAGGCAACCGATTTGCGCATGCCGCT 396
BSNT_00001___ 397 TCCCTCGCAGTAGCGGAAGCACCCGCGAAAGCTTACAACCCTTTATTTAT 446
||.||.|||||.|||||||||||.||.|||||.||.||.||..|.|||||
BPUM_0001___d 397 TCACTTGCAGTTGCGGAAGCACCAGCAAAAGCATATAATCCGCTCTTTAT 446
BSNT_00001___ 447 CTATGGGGGCGTCGGCTTAGGGAAAACGCACTTAATGCATGCGATCGGCC 496
.|||||||||||.||.|||||.||.||.|||||.|||||||||||.||.|
BPUM_0001___d 447 TTATGGGGGCGTTGGTTTAGGAAAGACTCACTTGATGCATGCGATTGGTC 496
BSNT_00001___ 497 ATTATGTAATAGATCATAATCCTTCTGCCAAAGTGGTTTATCTGTCTTCT 546
|||||||.||.||.||||||||.||.|||||||||||.|||||.||.|||
BPUM_0001___d 497 ATTATGTCATCGACCATAATCCATCAGCCAAAGTGGTCTATCTATCATCT 546
BSNT_00001___ 547 GAGAAATTTACAAACGAATTCATCAACTCTATCCGAGATAATAAAGCCGT 596
||.|||||||||||.|||||.||||||||.||||||||.||.|||||.||
BPUM_0001___d 547 GAAAAATTTACAAATGAATTTATCAACTCAATCCGAGACAACAAAGCTGT 596
BSNT_00001___ 597 CGACTTCCGCAATCGCTATCGAAATGTTGATGTGCTTTTGATAGATGATA 646
|||.|||||.|||||||||||.|||||.||||||||||||||||||||||
BPUM_0001___d 597 CGATTTCCGTAATCGCTATCGGAATGTCGATGTGCTTTTGATAGATGATA 646
BSNT_00001___ 647 TTCAATTTTTAGCGGGGAAAGAACAAACCCAGGAAGAATTTTTCCATACA 696
|||||||||||||.||.|||||||||||.||.|||||.||||||||||||
BPUM_0001___d 647 TTCAATTTTTAGCAGGAAAAGAACAAACACAAGAAGAGTTTTTCCATACA 696
BSNT_00001___ 697 TTTAACACATTGCACGAAGAAAGCAAACAAATCGTCATTTCAAGTGACCG 746
||.||||||.|.|||||||||||.||.||||||||||||||.||||||||
BPUM_0001___d 697 TTCAACACACTTCACGAAGAAAGTAAGCAAATCGTCATTTCTAGTGACCG 746
BSNT_00001___ 747 ACCGCCAAAGGAAATTCCGACACTTGAGGACAGATTGCGCTCTCGTTTTG 796
.|||||.||.|||||||||||||||||.||||||||.||||||||.||.|
BPUM_0001___d 747 GCCGCCGAAAGAAATTCCGACACTTGAAGACAGATTACGCTCTCGATTCG 796
BSNT_00001___ 797 AATGGGGACTTATTACAGATATCACACCGCCTGATCTAGAAACGAGAATT 846
|||||||.||.||.|||||.||.||.|||||.|||.||||||||.|.|||
BPUM_0001___d 797 AATGGGGCCTAATCACAGACATTACCCCGCCAGATTTAGAAACGCGTATT 846
BSNT_00001___ 847 GCAATTTTAAGAAAAAAAGCCAAAGCAGAAGGCCTCGATATTCCGAACGA 896
||.||||||.|||||||.||.||||||||.||..|.||.||||||||.||
BPUM_0001___d 847 GCGATTTTACGAAAAAAGGCAAAAGCAGAGGGATTAGACATTCCGAATGA 896
BSNT_00001___ 897 GGTTATGCTTTACATCGCGAATCAAATCGACAGCAATATTCGGGAACTCG 946
.||.|||||.||.||.||.|||||||||||||||||.|||||.|||||.|
BPUM_0001___d 897 AGTGATGCTCTATATTGCCAATCAAATCGACAGCAACATTCGTGAACTGG 946
BSNT_00001___ 947 AAGGAGCATTAATCAGAGTTGTCGCTTATTCATCTTTAATTAATAAAGAT 996
|.||.||.||.||..|.||.||.|||||.||.|||||||||||||||||.
BPUM_0001___d 947 AGGGTGCTTTGATTCGTGTCGTTGCTTACTCTTCTTTAATTAATAAAGAC 996
BSNT_00001___ 997 ATTAATGCTGATCTGGCCGCTGAGGCGTTGAAAGATATTATTCCTTCCTC 1046
||.|||||.|||||.||.||||||||..|.||.||.||.|||||.||.||
BPUM_0001___d 997 ATCAATGCAGATCTAGCAGCTGAGGCTCTAAAGGACATCATTCCATCGTC 1046
BSNT_00001___ 1047 AAAACCGAAAGTCATTACGATAAAAGAAATTCAGAGGGTAGTAGGCCAGC 1096
.||.||.|..||||||||.||.|||||.|||||.||..|.|||||.||||
BPUM_0001___d 1047 GAAGCCAAGGGTCATTACAATTAAAGATATTCAAAGAATTGTAGGGCAGC 1096
BSNT_00001___ 1097 AATTTAATATTAAACTCGAGGATTTCAAAGCAAAAAAACGGACAAAGTCA 1146
|||||||||||....|.||||||||||||||.||.|||||.||.||||||
BPUM_0001___d 1097 AATTTAATATTCGTTTAGAGGATTTCAAAGCGAAGAAACGTACGAAGTCA 1146
BSNT_00001___ 1147 GTAGCTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGA 1196
||.||||.|||..|.|||||.||||||||..|.||.||.||||||||.||
BPUM_0001___d 1147 GTTGCTTATCCAAGACAAATTGCCATGTATCTCTCTAGAGAAATGACCGA 1196
BSNT_00001___ 1197 TTCCTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGA 1246
|||||||||.||||||||.||.|||||.||.|||||.|||||||||||||
BPUM_0001___d 1197 TTCCTCTCTGCCTAAAATAGGAGAAGAATTCGGAGGTCGTGATCATACGA 1246
BSNT_00001___ 1247 CCGTTATTCATGCGCATGAAAAAATTTCGAAACTGCTGGCAGATGATGAA 1296
|.||.||||||||.|||||.||.|||||||||.|..|||..||.||||||
BPUM_0001___d 1247 CTGTCATTCATGCTCATGAGAAGATTTCGAAATTAATGGTTGAGGATGAA 1296
BSNT_00001___ 1297 CAGCTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAG 1341
|||||||||||||||||.||||||||.||||||||..|.|||||.
BPUM_0001___d 1297 CAGCTTCAGCAGCATGTCAAAGAAATAAAAGAACAATTAAAATAA 1341
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.