Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00001 and BPUM_0001

See DNA alignment / Visit BSNT_00001 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:56
# Commandline: needle
#    -asequence pep-align/BSNT_00001___dnaA.1.24716.seq
#    -bsequence pep-align/BPUM_0001___dnaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00001___dnaA-BPUM_0001___dnaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00001___dnaA-BPUM_0001___dnaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00001___dnaA
# 2: BPUM_0001___dnaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity:     421/446 (94.4%)
# Similarity:   433/446 (97.1%)
# Gaps:           0/446 ( 0.0%)
# Score: 2167.0
# 
#
#=======================================

BSNT_00001___      1 MENILDLWNQALAQIEKKLSKPSFETWMKSTKAHSLQGDTLTITAPNEFA     50
                     |||||||||:||.:||.|||||||||||||||||||||||||||||||||
BPUM_0001___d      1 MENILDLWNKALQKIETKLSKPSFETWMKSTKAHSLQGDTLTITAPNEFA     50

BSNT_00001___     51 RDWLESRYLHLIADTIYELTGEELSIKFVIPQNQDVEDFMPKPQVKKAVK    100
                     ||||||||||||||||||||||||||||:||||||..:.|||..:||..|
BPUM_0001___d     51 RDWLESRYLHLIADTIYELTGEELSIKFIIPQNQDEVEAMPKSPIKKMSK    100

BSNT_00001___    101 EDTSDFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIY    150
                     ||..|.||||||||||||||||||||||||||||||||||||||||||||
BPUM_0001___d    101 EDPVDIPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIY    150

BSNT_00001___    151 GGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0001___d    151 GGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVD    200

BSNT_00001___    201 FRNRYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHEESKQIVISSDRP    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0001___d    201 FRNRYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHEESKQIVISSDRP    250

BSNT_00001___    251 PKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEV    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0001___d    251 PKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEV    300

BSNT_00001___    301 MLYIANQIDSNIRELEGALIRVVAYSSLINKDINADLAAEALKDIIPSSK    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0001___d    301 MLYIANQIDSNIRELEGALIRVVAYSSLINKDINADLAAEALKDIIPSSK    350

BSNT_00001___    351 PKVITIKEIQRVVGQQFNIKLEDFKAKKRTKSVAFPRQIAMYLSREMTDS    400
                     |:|||||:|||:|||||||:||||||||||||||:|||||||||||||||
BPUM_0001___d    351 PRVITIKDIQRIVGQQFNIRLEDFKAKKRTKSVAYPRQIAMYLSREMTDS    400

BSNT_00001___    401 SLPKIGEEFGGRDHTTVIHAHEKISKLLADDEQLQQHVKEIKEQLK    446
                     |||||||||||||||||||||||||||:.:||||||||||||||||
BPUM_0001___d    401 SLPKIGEEFGGRDHTTVIHAHEKISKLMVEDEQLQQHVKEIKEQLK    446


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