Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00233 and BPUM_0115
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_00233___rpsN.1.24716.seq
# -bsequence dna-align/BPUM_0115___rpsN1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00233___rpsN-BPUM_0115___rpsN1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00233___rpsN-BPUM_0115___rpsN1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00233___rpsN
# 2: BPUM_0115___rpsN1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 170/186 (91.4%)
# Similarity: 170/186 (91.4%)
# Gaps: 0/186 ( 0.0%)
# Score: 786.0
#
#
#=======================================
BSNT_00233___ 1 GTGGCTAAAAAGTCTATGATTGCGAAACAACAACGTACACCAAAGTTTAA 50
|||||||||||||||||||||||||||||||||||.|.||.|||||||||
BPUM_0115___r 1 GTGGCTAAAAAGTCTATGATTGCGAAACAACAACGCAAACAAAAGTTTAA 50
BSNT_00233___ 51 AGTACAAGAGTACACACGCTGTGAACGCTGCGGACGTCCGCATTCAGTCA 100
|||.||||||||.||.|||||.|||||.||.||||||||.||||||||.|
BPUM_0115___r 51 AGTTCAAGAGTATACGCGCTGCGAACGTTGTGGACGTCCACATTCAGTAA 100
BSNT_00233___ 101 TTCGTAAATTTAAACTTTGCCGTATTTGTTTCCGTGAGCTTGCATATAAA 150
||||.||.||||||||||||||||||||||||||.||.||||||||||||
BPUM_0115___r 101 TTCGCAAGTTTAAACTTTGCCGTATTTGTTTCCGCGAACTTGCATATAAA 150
BSNT_00233___ 151 GGACAAATTCCTGGCGTGAAAAAAGCCAGCTGGTAA 186
|||||||||||||||||.||||||||||||||||||
BPUM_0115___r 151 GGACAAATTCCTGGCGTTAAAAAAGCCAGCTGGTAA 186
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