Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00233 and BPUM_0115

See DNA alignment / Visit BSNT_00233 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00233___rpsN.1.24716.seq
#    -bsequence pep-align/BPUM_0115___rpsN1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00233___rpsN-BPUM_0115___rpsN1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00233___rpsN-BPUM_0115___rpsN1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00233___rpsN
# 2: BPUM_0115___rpsN1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      59/61 (96.7%)
# Similarity:    59/61 (96.7%)
# Gaps:           0/61 ( 0.0%)
# Score: 316.0
# 
#
#=======================================

BSNT_00233___      1 MAKKSMIAKQQRTPKFKVQEYTRCERCGRPHSVIRKFKLCRICFRELAYK     50
                     ||||||||||||..||||||||||||||||||||||||||||||||||||
BPUM_0115___r      1 MAKKSMIAKQQRKQKFKVQEYTRCERCGRPHSVIRKFKLCRICFRELAYK     50

BSNT_00233___     51 GQIPGVKKASW     61
                     |||||||||||
BPUM_0115___r     51 GQIPGVKKASW     61


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