Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00246 and BPUM_0128
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00246___rpsM.1.24716.seq
# -bsequence dna-align/BPUM_0128___rpsM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00246___rpsM-BPUM_0128___rpsM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00246___rpsM-BPUM_0128___rpsM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00246___rpsM
# 2: BPUM_0128___rpsM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 327/366 (89.3%)
# Similarity: 327/366 (89.3%)
# Gaps: 0/366 ( 0.0%)
# Score: 1479.0
#
#
#=======================================
BSNT_00246___ 1 ATGGCTCGTATTGCTGGTGTAGATATCCCACGTGACAAACGTGTTGTTAT 50
||||||||||||||||||||||||||.||||||||.|||||||||||.||
BPUM_0128___r 1 ATGGCTCGTATTGCTGGTGTAGATATTCCACGTGATAAACGTGTTGTCAT 50
BSNT_00246___ 51 TTCTTTAACATACATCTTCGGAATTGGCCGCACAACGGCTCAGCAAGTTT 100
||||||||||||..|.||.||||||||.||.||.||.||.||.|||||..
BPUM_0128___r 51 TTCTTTAACATATGTTTTTGGAATTGGTCGTACGACTGCGCAACAAGTCC 100
BSNT_00246___ 101 TAAAAGAAGCTGGAGTTTCAGAAGATACTCGTGTGCGCGATCTTACTGAA 150
|.||||||||.||.|||||.|||||.|||||.||.||||||||.||||||
BPUM_0128___r 101 TTAAAGAAGCAGGTGTTTCTGAAGACACTCGCGTTCGCGATCTAACTGAA 150
BSNT_00246___ 151 GAAGAACTTGGTAAAATCCGTGATATTATTGACAAACTGAAAGTAGAAGG 200
||.|||||||||||||||||||||||.|||||||||||.|||||||||||
BPUM_0128___r 151 GACGAACTTGGTAAAATCCGTGATATCATTGACAAACTTAAAGTAGAAGG 200
BSNT_00246___ 201 TGACCTTCGCCGTGAAGTTTCTCTTAATATCAAACGTCTGATCGAAATCG 250
|||||||||.|||||||||||.|||||.||.||.|||||.||.|||||||
BPUM_0128___r 201 TGACCTTCGTCGTGAAGTTTCACTTAACATTAAGCGTCTAATTGAAATCG 250
BSNT_00246___ 251 GAAGCTACCGCGGAATCCGTCATCGCAGAGGATTACCTGTTCGCGGACAA 300
|||||||||||||||||||||||||.||||||.|.||||||||.||||||
BPUM_0128___r 251 GAAGCTACCGCGGAATCCGTCATCGTAGAGGACTTCCTGTTCGTGGACAA 300
BSNT_00246___ 301 AACTCTAAAAACAACGCGCGTACTCGTAAAGGTCCGCGTCGTACTGTAGC 350
|||.|.||||||||||||||||||||||||||||||||||||||||||||
BPUM_0128___r 301 AACACAAAAAACAACGCGCGTACTCGTAAAGGTCCGCGTCGTACTGTAGC 350
BSNT_00246___ 351 TAACAAGAAAAAATAA 366
||||||||||||||||
BPUM_0128___r 351 TAACAAGAAAAAATAA 366
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