Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00246 and BPUM_0128

See DNA alignment / Visit BSNT_00246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence pep-align/BSNT_00246___rpsM.1.24716.seq
#    -bsequence pep-align/BPUM_0128___rpsM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00246___rpsM-BPUM_0128___rpsM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00246___rpsM-BPUM_0128___rpsM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00246___rpsM
# 2: BPUM_0128___rpsM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:     118/121 (97.5%)
# Similarity:   121/121 (100.0%)
# Gaps:           0/121 ( 0.0%)
# Score: 593.0
# 
#
#=======================================

BSNT_00246___      1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTE     50
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
BPUM_0128___r      1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTE     50

BSNT_00246___     51 EELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQ    100
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0128___r     51 DELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQ    100

BSNT_00246___    101 NSKNNARTRKGPRRTVANKKK    121
                     |:|||||||||||||||||||
BPUM_0128___r    101 NTKNNARTRKGPRRTVANKKK    121


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