Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00348 and BPUM_0165
See
Amino acid alignment /
Visit
BSNT_00348 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence dna-align/BSNT_00348___glmS.1.24716.seq
# -bsequence dna-align/BPUM_0165___glmS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00348___glmS-BPUM_0165___glmS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00348___glmS-BPUM_0165___glmS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00348___glmS
# 2: BPUM_0165___glmS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1820
# Identity: 1460/1820 (80.2%)
# Similarity: 1460/1820 (80.2%)
# Gaps: 34/1820 ( 1.9%)
# Score: 5808.0
#
#
#=======================================
BSNT_00348___ 1 ATGTGTGGAATCGTAGGTTATATCGGTCAGCTTGATGCGAAGGAAATTTT 50
|||||||||||||||||||||||.||||||..|||||||||||||||.||
BPUM_0165___g 1 ATGTGTGGAATCGTAGGTTATATTGGTCAGAATGATGCGAAGGAAATCTT 50
BSNT_00348___ 51 ATTAAAAGGGTTAGAGAAGCTTGAGTATCGCGGTTATGACTCTGCTGGTA 100
|||||||||.|||||||||||||||||.||.||.||||||||.||.||||
BPUM_0165___g 51 ATTAAAAGGTTTAGAGAAGCTTGAGTACCGTGGGTATGACTCAGCAGGTA 100
BSNT_00348___ 101 TTGCTGTTGCCAACGAACAGGGAATCCATGTGTTCAAAGAAAAAGGACGC 150
|.|||||.||.||||||.|.||..|.|||||||||||||||||||||||.
BPUM_0165___g 101 TCGCTGTGGCAAACGAAGAAGGCGTGCATGTGTTCAAAGAAAAAGGACGT 150
BSNT_00348___ 151 ATTGCAGATCTTCGTGAAGTTGTGGATGCCAATGTAGAGGCGAAAGCCGG 200
||.||.||.||||||||||||||.|||||.||.||||...|...|||.||
BPUM_0165___g 151 ATCGCTGAGCTTCGTGAAGTTGTTGATGCAAACGTAGCATCTTCAGCTGG 200
BSNT_00348___ 201 AATTGGGCATACTCGCTGGGCTACACACGGCGAACCAAGCTATCTGAACG 250
|||.||.|||||.||||||||.||||||||.|.|||||||.||||.||.|
BPUM_0165___g 201 AATCGGACATACACGCTGGGCAACACACGGTGTACCAAGCCATCTAAATG 250
BSNT_00348___ 251 CTCACCCGCATCAAAGCGC-ACTGGGCCGCTTTACACTTGTTCATAACGG 299
|.||.|||||||||||.|| .|| |||||.|||||.||||||||||||||
BPUM_0165___g 251 CGCATCCGCATCAAAGTGCTTCT-GGCCGTTTTACGCTTGTTCATAACGG 299
BSNT_00348___ 300 CGTGATCGAGAACTATGTTCAGCTGAAGCAAGAGTATTTGCAAGATGT-A 348
.||.||||||||||||||.||..|||..|..||.|||||.|||||.|| |
BPUM_0165___g 300 TGTCATCGAGAACTATGTACAATTGACACGCGAATATTTACAAGACGTCA 349
BSNT_00348___ 349 GAGCTTAAAAGTGACACCGATACAGAAGTAGTCGTTCAAGTAATCGAGCA 398
.| ||.|||||.|||||.||||||||.||.||.||||||||.|||||.||
BPUM_0165___g 350 CA-CTAAAAAGCGACACAGATACAGAGGTTGTTGTTCAAGTCATCGAACA 398
BSNT_00348___ 399 ATTCGTCAATGGAGGACTTGAGACAGAAGAAGCGTTCCGTAAAACACTT- 447
|||.||||...||||.|||||.|||||.|||||.||||||.||||.|||
BPUM_0165___g 399 ATTTGTCAGCAGAGGTCTTGATACAGAGGAAGCTTTCCGTCAAACGCTTC 448
BSNT_00348___ 448 ----ACACTGTTAAAAGGCTCTTATGCAATTGCTTTATTCGATAACGACA 493
|| |||||||||||||.|||||||||.|.|||||||||||.|
BPUM_0165___g 449 TTCAAC-----TAAAAGGCTCTTACGCAATTGCTCTTTTCGATAACGAAA 493
BSNT_00348___ 494 ACAGAGAAACGATTTTTGTAGCGAAAAACAAAAGCCCTCTATTAGTAGGT 543
|||.||||||.||.|.|||.|||||||||||||||||..||||.||.|||
BPUM_0165___g 494 ACAAAGAAACAATCTATGTGGCGAAAAACAAAAGCCCATTATTGGTTGGT 543
BSNT_00348___ 544 CTTGGAGATACA-TTCAACGTCGTAGCATCTGATGCAATGGCGATGCTTC 592
.|.||||| |.| ||||||||.|||||.|||||.||||||||||||||||
BPUM_0165___g 544 TTCGGAGA-AGATTTCAACGTTGTAGCTTCTGACGCAATGGCGATGCTTC 592
BSNT_00348___ 593 AAGTAACCAACGAATATGTTGAGCTGATGGATAAAGAAATGGTTATCGTC 642
|||||||.||||||||||..||..|.|||||||||||||||||.||.|||
BPUM_0165___g 593 AAGTAACAAACGAATATGCGGAATTAATGGATAAAGAAATGGTCATTGTC 642
BSNT_00348___ 643 ACTGATGACCAAGTTGTCATCAAAAACCTTGATGGTGACGTGATTACACG 692
||..|.|||.|.|||.|.||.|||||||||||.|||||..|.||.|||||
BPUM_0165___g 643 ACAAAAGACGAGGTTATTATTAAAAACCTTGACGGTGATATCATGACACG 692
BSNT_00348___ 693 TGCGTCTTATATTGCTGAGCTTGATGCCAGTGATATCGAAAAAGGCACGT 742
|.|.||||||||.||||||||.|||||.||.||.|||||.||||||||.|
BPUM_0165___g 693 TCCTTCTTATATCGCTGAGCTAGATGCAAGCGACATCGAGAAAGGCACAT 742
BSNT_00348___ 743 ACCCTCACTACATGTTGAAAGAAACGGATGAGCAGCCTGTTGTTATGCGC 792
|.||||||||||||||.||||||||||||||||||||..|||||||||||
BPUM_0165___g 743 ATCCTCACTACATGTTAAAAGAAACGGATGAGCAGCCGCTTGTTATGCGC 792
BSNT_00348___ 793 AAAATCATCCAAACGTATCAAGATGAAAACGGCAAGCTGTCTGTGCCTGG 842
||||||||||||...||||||||.|||||||||||.|||||.||..||||
BPUM_0165___g 793 AAAATCATCCAAGAATATCAAGACGAAAACGGCAAACTGTCAGTCGCTGG 842
BSNT_00348___ 843 TGATATCGCTGCCGCTGTAGCGGAAGCGGACCGCATCTATATCATTGGC- 891
.||||||||...|||.|||||.|||||.||||||||.||.||| .||||
BPUM_0165___g 843 CGATATCGCAAGCGCAGTAGCAGAAGCAGACCGCATTTACATC-GTGGCT 891
BSNT_00348___ 892 TGCGGAACAAGCTACCATGCAGGACTTGTCGGTAAACAATATATTGAAAT 941
||.|||||.||||||||||||||||||||.||||||||||||||||||..
BPUM_0165___g 892 TGTGGAACGAGCTACCATGCAGGACTTGTTGGTAAACAATATATTGAAGA 941
BSNT_00348___ 942 GTGGGCAAACGTGCCGGTTGAAGTGCATGTAGCGAGTGAATTCTCCTACA 991
.||||||||.||.||.||.|||||.||||||||.|||||||||||.||||
BPUM_0165___g 942 CTGGGCAAAAGTACCTGTAGAAGTCCATGTAGCAAGTGAATTCTCTTACA 991
BSNT_00348___ 992 ACATGCCGCTTCTGTCTAAGAAACCGCTCTTCATTTTCCTTTCTCAAAGC 1041
|||||||||||||.||.||.||.|||.|.|||||.||||||||||||...
BPUM_0165___g 992 ACATGCCGCTTCTATCGAAAAAGCCGTTGTTCATCTTCCTTTCTCAATCT 1041
BSNT_00348___ 1042 GGAGAAACAGCAGACAGCCGCGCGGTTCTCGTTCAAGTCAAAGCGCTCGG 1091
||.||.||.||.||||||||.||.||.||.|||||||||||||.|||.||
BPUM_0165___g 1042 GGGGAGACTGCGGACAGCCGTGCTGTACTTGTTCAAGTCAAAGAGCTTGG 1091
BSNT_00348___ 1092 ACACAAAGCCCTGACAATCACAAACGTACCTGGATCAACGCTTTCTCGTG 1141
.||.|||||..|.||.||||||||||||||.|||||.|||||||||||||
BPUM_0165___g 1092 TCATAAAGCATTAACGATCACAAACGTACCAGGATCTACGCTTTCTCGTG 1141
BSNT_00348___ 1142 AAGCTGACTATACATTGCTGCTTCATGCAGGCCCTGAGATCGCTGTTGCG 1191
||||.||||..||||||||.|||||||||||.||.||.|||||.||.||.
BPUM_0165___g 1142 AAGCGGACTTCACATTGCTTCTTCATGCAGGGCCAGAAATCGCAGTGGCT 1191
BSNT_00348___ 1192 TCAACAAAAGCATACACTGCACAAATTGCAGTTCTTGCGGTTCTTGCTTC 1241
|||||||||||.|||||.||.|||||.||.|||||||||.|.|||||.||
BPUM_0165___g 1192 TCAACAAAAGCTTACACAGCGCAAATCGCTGTTCTTGCGATCCTTGCATC 1241
BSNT_00348___ 1242 TGTGGCTGCTGACAAAAACGGCATCGATATC--GGATTTGACCTCGTCAA 1289
|||.||.|||||...|||.|| ||.||.|| |..||.|||||.||.||
BPUM_0165___g 1242 TGTTGCAGCTGAATTAAATGG--TCAATCTCTTGACTTCGACCTTGTGAA 1289
BSNT_00348___ 1290 AGAACTCGCTATCGCTGCAAACGCAATGGAAGCTCTATG-CGACCAGAAA 1338
|||.||.|..||.|..|||||||||||||||||.|| || .||.||.||.
BPUM_0165___g 1290 AGAGCTTGGAATTGTAGCAAACGCAATGGAAGCCCT-TGTGGATCAAAAG 1338
BSNT_00348___ 1339 GACGAAATGGAAATGATCGCCCGTGAATACCTGACTGTATCCAGAAACGC 1388
||.|||||||||...|||||.|||||.|.|.|.||.||..|..|.|||||
BPUM_0165___g 1339 GATGAAATGGAACAAATCGCTCGTGACTTCTTCACAGTGACACGTAACGC 1388
BSNT_00348___ 1389 TTTCTTCATCGGACGTGGCCTTGACTACTTCGTATGTG----TCGAAGGC 1434
.|||||.||||||.|.||.||||||||| |||||| |.|||||.
BPUM_0165___g 1389 ATTCTTTATCGGAAGAGGACTTGACTAC----TATGTGTGCCTTGAAGGT 1434
BSNT_00348___ 1435 GCACTGAAGCTGAAAGAGATTTCTTACATCCAGGCAGAAGGTTTTGCCGG 1484
.||.|.||.||.||||||||.|||||||||||.||||||||.|||||.||
BPUM_0165___g 1435 TCATTAAAACTAAAAGAGATCTCTTACATCCAAGCAGAAGGCTTTGCTGG 1484
BSNT_00348___ 1485 CGGTGAGCTAAAGCACGGAACGATTGCCTTGATCGAACAAGGAACACCAG 1534
|||.||.||.||.|||||.||.|||||.||.||.|||.||||.|||||.|
BPUM_0165___g 1485 CGGAGAACTCAAACACGGCACCATTGCTTTAATTGAAGAAGGCACACCGG 1534
BSNT_00348___ 1535 T-ATTCGCACTGGCAACTCAAGAGCACGTAAACCTAAGCATCCGCGGAAA 1583
| ||| ||.||.|||||.|||||||||||.|||||.|||||.|||||.||
BPUM_0165___g 1535 TCATT-GCCCTTGCAACACAAGAGCACGTGAACCTCAGCATTCGCGGGAA 1583
BSNT_00348___ 1584 CGTCAAAGAAGTTGCCGCTCGCGGAGCAAACACATGCATCATCTCACTGA 1633
||||||||||||.|..||.||.||.||||||.||||..||||||||||.|
BPUM_0165___g 1584 CGTCAAAGAAGTCGTTGCACGTGGTGCAAACCCATGTGTCATCTCACTAA 1633
BSNT_00348___ 1634 AAGGCCTAGACGATGCGGATGACAGATTCGTACTGCCGGAAGTAAACCCA 1683
||||||||||.||.|..|..|||.|.|||||.||.||.|..|||.|.|||
BPUM_0165___g 1634 AAGGCCTAGAAGACGAAGGCGACCGTTTCGTCCTTCCAGCTGTACATCCA 1683
BSNT_00348___ 1684 GCGCTTGCTCCGTTGGTATCTGTTGTTCCATTGCAGCTGATCGCTTACTA 1733
||.|||||.||..|.|.|||||||||||||||.|||||.|||||||||||
BPUM_0165___g 1684 GCACTTGCACCACTTGCATCTGTTGTTCCATTACAGCTAATCGCTTACTA 1733
BSNT_00348___ 1734 TGCTGCACTGCATCGCGGCTGTGATGTGGATAAACCTCGTAACCTTGCGA 1783
.||.||.||.||.|||||.|||||||||||||||||.|||||||||||||
BPUM_0165___g 1734 CGCAGCCCTTCACCGCGGGTGTGATGTGGATAAACCACGTAACCTTGCGA 1783
BSNT_00348___ 1784 AGAGTGTTACTGTGGAGTAA 1803
|||||||.||.||||||||.
BPUM_0165___g 1784 AGAGTGTGACGGTGGAGTAG 1803
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.