Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00348 and BPUM_0165

See DNA alignment / Visit BSNT_00348 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence pep-align/BSNT_00348___glmS.1.24716.seq
#    -bsequence pep-align/BPUM_0165___glmS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00348___glmS-BPUM_0165___glmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00348___glmS-BPUM_0165___glmS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00348___glmS
# 2: BPUM_0165___glmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     529/600 (88.2%)
# Similarity:   563/600 (93.8%)
# Gaps:           0/600 ( 0.0%)
# Score: 2702.0
# 
#
#=======================================

BSNT_00348___      1 MCGIVGYIGQLDAKEILLKGLEKLEYRGYDSAGIAVANEQGIHVFKEKGR     50
                     ||||||||||.||||||||||||||||||||||||||||:|:||||||||
BPUM_0165___g      1 MCGIVGYIGQNDAKEILLKGLEKLEYRGYDSAGIAVANEEGVHVFKEKGR     50

BSNT_00348___     51 IADLREVVDANVEAKAGIGHTRWATHGEPSYLNAHPHQSALGRFTLVHNG    100
                     ||:|||||||||.:.||||||||||||.||:|||||||||.|||||||||
BPUM_0165___g     51 IAELREVVDANVASSAGIGHTRWATHGVPSHLNAHPHQSASGRFTLVHNG    100

BSNT_00348___    101 VIENYVQLKQEYLQDVELKSDTDTEVVVQVIEQFVNGGLETEEAFRKTLT    150
                     ||||||||.:||||||.||||||||||||||||||:.||:||||||:||.
BPUM_0165___g    101 VIENYVQLTREYLQDVTLKSDTDTEVVVQVIEQFVSRGLDTEEAFRQTLL    150

BSNT_00348___    151 LLKGSYAIALFDNDNRETIFVAKNKSPLLVGLGDTFNVVASDAMAMLQVT    200
                     .||||||||||||:|:|||:|||||||||||.|:.|||||||||||||||
BPUM_0165___g    151 QLKGSYAIALFDNENKETIYVAKNKSPLLVGFGEDFNVVASDAMAMLQVT    200

BSNT_00348___    201 NEYVELMDKEMVIVTDDQVVIKNLDGDVITRASYIAELDASDIEKGTYPH    250
                     |||.|||||||||||.|:|:|||||||::||.||||||||||||||||||
BPUM_0165___g    201 NEYAELMDKEMVIVTKDEVIIKNLDGDIMTRPSYIAELDASDIEKGTYPH    250

BSNT_00348___    251 YMLKETDEQPVVMRKIIQTYQDENGKLSVPGDIAAAVAEADRIYIIGCGT    300
                     ||||||||||:|||||||.||||||||||.||||:||||||||||:.|||
BPUM_0165___g    251 YMLKETDEQPLVMRKIIQEYQDENGKLSVAGDIASAVAEADRIYIVACGT    300

BSNT_00348___    301 SYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGET    350
                     |||||||||||||.||.|||||||||||||||||||||||||||||||||
BPUM_0165___g    301 SYHAGLVGKQYIEDWAKVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGET    350

BSNT_00348___    351 ADSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTK    400
                     |||||||||||.|||||||||||||||||||||:||||||||||||||||
BPUM_0165___g    351 ADSRAVLVQVKELGHKALTITNVPGSTLSREADFTLLLHAGPEIAVASTK    400

BSNT_00348___    401 AYTAQIAVLAVLASVAADKNGIDIGFDLVKELAIAANAMEALCDQKDEME    450
                     ||||||||||:||||||:.||..:.|||||||.|.|||||||.|||||||
BPUM_0165___g    401 AYTAQIAVLAILASVAAELNGQSLDFDLVKELGIVANAMEALVDQKDEME    450

BSNT_00348___    451 MIAREYLTVSRNAFFIGRGLDYFVCVEGALKLKEISYIQAEGFAGGELKH    500
                     .|||::.||:||||||||||||:||:||:|||||||||||||||||||||
BPUM_0165___g    451 QIARDFFTVTRNAFFIGRGLDYYVCLEGSLKLKEISYIQAEGFAGGELKH    500

BSNT_00348___    501 GTIALIEQGTPVFALATQEHVNLSIRGNVKEVAARGANTCIISLKGLDDA    550
                     |||||||:||||.|||||||||||||||||||.|||||.|:||||||:|.
BPUM_0165___g    501 GTIALIEEGTPVIALATQEHVNLSIRGNVKEVVARGANPCVISLKGLEDE    550

BSNT_00348___    551 DDRFVLPEVNPALAPLVSVVPLQLIAYYAALHRGCDVDKPRNLAKSVTVE    600
                     .||||||.|:||||||.|||||||||||||||||||||||||||||||||
BPUM_0165___g    551 GDRFVLPAVHPALAPLASVVPLQLIAYYAALHRGCDVDKPRNLAKSVTVE    600


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