Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00042 and BPUM_0519

See Amino acid alignment / Visit BSNT_00042 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:58
# Commandline: needle
#    -asequence dna-align/BSNT_00042___yaaL.1.24716.seq
#    -bsequence dna-align/BPUM_0519___yaaL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00042___yaaL-BPUM_0519___yaaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00042___yaaL-BPUM_0519___yaaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00042___yaaL
# 2: BPUM_0519___yaaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity:     173/232 (74.6%)
# Similarity:   173/232 (74.6%)
# Gaps:          14/232 ( 6.0%)
# Score: 622.5
# 
#
#=======================================

BSNT_00042___      1 ATGGGTTTTCTTCGCAAGAAAA-CATTAAGAAGAGAGTTTGATGAAAAAC     49
                     ||||||||||||||| |||||| ||.|..|||.|||.||.|||||.|||.
BPUM_0519___y      1 ATGGGTTTTCTTCGC-AGAAAATCAATTCGAAAAGAATTCGATGAGAAAT     49

BSNT_00042___     50 TAACCGAGCAGCTTTTTAAGCAAAAGGAAGAGTGGAACAGGCAAAAAAAG     99
                     |||...|.|||||||||||||||||||||||.||||||||.|||||||||
BPUM_0519___y     50 TAATTCAACAGCTTTTTAAGCAAAAGGAAGAATGGAACAGACAAAAAAAG     99

BSNT_00042___    100 CTGGTCGAAAAAAGCTTAGAACCGTCTGCTGAAGTGTTATACGAACTGAA    149
                     ||.||||.|||.|||.|.||.||.||..|.||..|..|||.|||| |.||
BPUM_0519___y    100 CTTGTCGCAAATAGCGTTGAGCCTTCACCGGACATTCTATTCGAA-TTAA    148

BSNT_00042___    150 AG-TAGCTGAAGCGAAGTATTTTTTTTACTTAAGGGAAGCGAAGCAGCGA    198
                     || |.|||.||||||||||.|||||.||..||||.||||||||..||.||
BPUM_0519___y    149 AGCTTGCTCAAGCGAAGTACTTTTTCTATCTAAGAGAAGCGAAAAAGAGA    198

BSNT_00042___    199 AATTTA-----AAAATCAGCCGGTGGAAGTAA    225
                     ||||||     |||  ||.|.||.|..||   
BPUM_0519___y    199 AATTTACGTTTAAA--CAACTGGAGATAG---    225


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