Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00042 and BPUM_0519

See DNA alignment / Visit BSNT_00042 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:58
# Commandline: needle
#    -asequence pep-align/BSNT_00042___yaaL.1.24716.seq
#    -bsequence pep-align/BPUM_0519___yaaL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00042___yaaL-BPUM_0519___yaaL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00042___yaaL-BPUM_0519___yaaL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00042___yaaL
# 2: BPUM_0519___yaaL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      53/74 (71.6%)
# Similarity:    69/74 (93.2%)
# Gaps:           0/74 ( 0.0%)
# Score: 304.0
# 
#
#=======================================

BSNT_00042___      1 MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELK     50
                     |||||:|::|:||||||.:||||||||||||||||..|:|||.::|:|||
BPUM_0519___y      1 MGFLRRKSIRKEFDEKLIQQLFKQKEEWNRQKKLVANSVEPSPDILFELK     50

BSNT_00042___     51 VAEAKYFFYLREAKQRNLKISRWK     74
                     :|:|||||||||||:|||:::.|:
BPUM_0519___y     51 LAQAKYFFYLREAKKRNLRLNNWR     74


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.