Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04059 and BPUM_2435
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:34
# Commandline: needle
# -asequence dna-align/BSNT_04059___ysxB.1.24716.seq
# -bsequence dna-align/BPUM_2435___ysxB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04059___ysxB-BPUM_2435___ysxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04059___ysxB-BPUM_2435___ysxB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04059___ysxB
# 2: BPUM_2435___ysxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity: 201/350 (57.4%)
# Similarity: 201/350 (57.4%)
# Gaps: 79/350 (22.6%)
# Score: 646.0
#
#
#=======================================
BSNT_04059___ 1 ATGATTCAGGCAACAATCAGAAGGTCTCATGATAAAGGCATATTGTCTTT 50
BPUM_2435___y 0 -------------------------------------------------- 0
BSNT_04059___ 51 TGAAATGACGGGCCATGCGAATTTTGCTGAACATGGACAAGATCTTGTTT 100
|||||.||.|||||..|.|||||||||.|.||.||.|||||.||||
BPUM_2435___y 1 ----ATGACTGGACATGCCGAGTTTGCTGAAAAAGGTCAGGATCTCGTTT 46
BSNT_04059___ 101 GTGCCGGAGTGACAGCCGTTGTGTTTGGAGCCGTTAACGCGGTCATTGTG 150
||||.|||||..|.||.|||||.||.||..|.||.||..|..|.||||..
BPUM_2435___y 47 GTGCAGGAGTATCTGCTGTTGTTTTCGGCTCAGTCAATTCAATTATTGCA 96
BSNT_04059___ 151 CTCGCGGGCTTCGAGCCGCTTCTTGATATAGGGGAGGACGGGGGGTATTT 200
||..|.||.||.||.||.||.||||||||.||.|||||.||.||.|||||
BPUM_2435___y 97 CTGACAGGATTGGACCCTCTGCTTGATATTGGCGAGGAAGGCGGCTATTT 146
BSNT_04059___ 201 TTATTTTGAATTCCCTGAATCTCTTGATCCAGAGGCACG---CC----AA 243
.|.|||||||.|.||.| |||||.||||..|| | || ||
BPUM_2435___y 147 CTCTTTTGAAATGCCGG------TTGATACAGATCCA-GTATCCTTTGAA 189
BSNT_04059___ 244 AAAGCTCAGCTGCTGATTGAAGGCATGATTGTTTCGCTGGAGACAATCGA 293
|||||.||||||||..|.|||||.|||.|.|||||..|.||.|||||.||
BPUM_2435___y 190 AAAGCCCAGCTGCTTTTAGAAGGTATGGTCGTTTCCTTAGAAACAATTGA 239
BSNT_04059___ 294 ACGGGATTACAAAGACAACTTGCGTGTGA----CCACAAACATAATATAG 339
|||.|||||..|.|| ||..|||.|| |.||||| ||.||||
BPUM_2435___y 240 ACGAGATTATCACGA----TTATGTGAGAATATCTACAAA---AAAATAG 282
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