Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04059 and BPUM_2435

See DNA alignment / Visit BSNT_04059 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence pep-align/BSNT_04059___ysxB.1.24716.seq
#    -bsequence pep-align/BPUM_2435___ysxB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04059___ysxB-BPUM_2435___ysxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04059___ysxB-BPUM_2435___ysxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04059___ysxB
# 2: BPUM_2435___ysxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      64/112 (57.1%)
# Similarity:    77/112 (68.8%)
# Gaps:          19/112 (17.0%)
# Score: 340.0
# 
#
#=======================================

BSNT_04059___      1 MIQATIRRSHDKGILSFEMTGHANFAEHGQDLVCAGVTAVVFGAVNAVIV     50
                                       |||||.|||.|||||||||:|||||:||::|.
BPUM_2435___y      1 ------------------MTGHAEFAEKGQDLVCAGVSAVVFGSVNSIIA     32

BSNT_04059___     51 LAGFEPLLDIGEDGGYFYFEFPESLDPEARQKAQLLIEGMIVSLETIERD    100
                     |.|.:|||||||:||||.||.|...||.:.:|||||:|||:|||||||||
BPUM_2435___y     33 LTGLDPLLDIGEEGGYFSFEMPVDTDPVSFEKAQLLLEGMVVSLETIERD     82

BSNT_04059___    101 YKDNLRVTTNII    112
                     |.|.:|::|.. 
BPUM_2435___y     83 YHDYVRISTKK-     93


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.