Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05003 and BPUM_3022
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_05003___yvgY.1.24716.seq
# -bsequence dna-align/BPUM_3022___merP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05003___yvgY-BPUM_3022___merP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05003___yvgY-BPUM_3022___merP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05003___yvgY
# 2: BPUM_3022___merP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 141/217 (65.0%)
# Similarity: 141/217 (65.0%)
# Gaps: 17/217 ( 7.8%)
# Score: 386.0
#
#
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BSNT_05003___ 1 ATGGAACAAAAAACATTGCAAGTTGAAGGAATGTCTTGTCAG-CACTGCG 49
.||||||||..||||.|.|||||..|.||.|||||||| |.| ||.||||
BPUM_3022___m 1 GTGGAACAAGCAACACTTCAAGTGCAGGGCATGTCTTG-CGGACATTGCG 49
BSNT_05003___ 50 TCAAAGCAGTAGAAACAAGCGTAGGAGAACTGGACGGCGTCAGTG---CC 96
|.||||||||.|||..||..|||||||||||.|..||.|| || |.
BPUM_3022___m 50 TGAAAGCAGTCGAAGGAAATGTAGGAGAACTAGCAGGTGT---TGAATCT 96
BSNT_05003___ 97 GTTCATGTCAATCTGGAAGCGGGTAAAGTCGATGTTTCGTTTGATGCTGA 146
||..|.|||.||.|.||....||..|.||.||.|||||.|||.|..|.||
BPUM_3022___m 97 GTGAAAGTCCATTTAGACAAAGGAGAGGTGGAAGTTTCATTTCACCCAGA 146
BSNT_05003___ 147 CAAAGTATCA-GT--CAAAGATATTGCGGATGCGATAGAAGATCAGGGCT 193
..||| ||| || ||..| |||..|.||||..||.|||||.|||||.|
BPUM_3022___m 147 TCAAG--TCACGTTGCACCG-TATCTCTGATGTAATTGAAGAACAGGGAT 193
BSNT_05003___ 194 ATGACGTAGCTGAGTGA 210
||||.||.|.|.|.
BPUM_3022___m 194 ATGATGTCGTTTAA--- 207
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