Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05003 and BPUM_3022

See DNA alignment / Visit BSNT_05003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_05003___yvgY.1.24716.seq
#    -bsequence pep-align/BPUM_3022___merP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05003___yvgY-BPUM_3022___merP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05003___yvgY-BPUM_3022___merP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05003___yvgY
# 2: BPUM_3022___merP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 69
# Identity:      43/69 (62.3%)
# Similarity:    55/69 (79.7%)
# Gaps:           1/69 ( 1.4%)
# Score: 220.0
# 
#
#=======================================

BSNT_05003___      1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADK     50
                     |||.||||:||||.|||||||.:||||.||.:|.|:|:.|:|:|||..|:
BPUM_3022___m      1 MEQATLQVQGMSCGHCVKAVEGNVGELAGVESVKVHLDKGEVEVSFHPDQ     50

BSNT_05003___     51 VSVKDIADAIEDQGYDVAE     69
                     |::..|:|.||:|||||. 
BPUM_3022___m     51 VTLHRISDVIEEQGYDVV-     68


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