Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05291 and BPUM_3113
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_05291___yvcL.1.24716.seq
# -bsequence dna-align/BPUM_3113.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05291___yvcL-BPUM_3113.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05291___yvcL-BPUM_3113.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05291___yvcL
# 2: BPUM_3113
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 952
# Identity: 711/952 (74.7%)
# Similarity: 711/952 (74.7%)
# Gaps: 2/952 ( 0.2%)
# Score: 2579.0
#
#
#=======================================
BSNT_05291___ 1 ATGTCATTTGCATCAGAAACAAAAAAAGAATTAACGAATCTGGAAGTGAA 50
||||||||||||||.||||||||||||||..|.||.||||||||.|||||
BPUM_3113 1 ATGTCATTTGCATCCGAAACAAAAAAAGAGCTGACTAATCTGGACGTGAA 50
BSNT_05291___ 51 GGACTGCTGCATTAATGCCGAGCTGTCTGCACTCATTCGGATGAATGGAG 100
|||||||||||..||.||.|||||.|||||.|||||.||.|||||.||..
BPUM_3113 51 GGACTGCTGCACAAAAGCAGAGCTTTCTGCCCTCATCCGTATGAACGGTT 100
BSNT_05291___ 101 CTTTATCATTTACAAACCGCCATCTCGTACTCGATGTTCAAACCGAAAAC 150
|.|||||.||..|.||.||..|..|..|.||.|||.|.||.||.||.|||
BPUM_3113 101 CATTATCTTTCTCTAATCGAAAATTAATTCTAGATATACAGACAGAGAAC 150
BSNT_05291___ 151 GCGGCGATTGCCCGCCGCATCTATACATTGCTGAAAAAACAATATGATGT 200
||.|||||.||..|.||.||.|||||..||||.|||||..||||||||||
BPUM_3113 151 GCAGCGATCGCAAGGCGGATTTATACGCTGCTAAAAAAGAAATATGATGT 200
BSNT_05291___ 201 GTCGGTCGAGCTGCTGGTCAGAAAGAAAATGCGGCTGAAAAAGAATAACG 250
..|.||||||.||||.||..|.|||||||||.|..|.|||||||||||.|
BPUM_3113 201 CACAGTCGAGTTGCTCGTTCGTAAGAAAATGAGATTAAAAAAGAATAATG 250
BSNT_05291___ 251 TCTATATTGTGCGTTTTTCAGAAAATGCAAAAACGATCTTAGAGGATTTA 300
|.||||||||..|..|...||||...||.|||||.||.|||||||||||.
BPUM_3113 251 TGTATATTGTCAGACTGGTAGAACGAGCGAAAACCATTTTAGAGGATTTG 300
BSNT_05291___ 301 AAAATACTCGGGGAGAATTTTGTGTTTGAACGAAGTATTTCGAAAGAGCT 350
||||||.|.||.||..|.|||||.|||||.||.|.||||||..|||||||
BPUM_3113 301 AAAATATTAGGTGAACAATTTGTATTTGAGCGTAATATTTCAGAAGAGCT 350
BSNT_05291___ 351 GGTTAAAAAGAGGTGCTGCAAGCGTTCTTATATGAGAGGAGCATTTTTGG 400
.||.||.||.||.|||||.|||||.||.|||||||||||.||.|||||.|
BPUM_3113 351 TGTAAAGAAAAGATGCTGTAAGCGCTCGTATATGAGAGGTGCTTTTTTAG 400
BSNT_05291___ 401 CAGGAGGTTCGGTCAATAACCCGGAAACCTCCTCGTATCATTTAGAAATC 450
||||.|||||.||.||||||||.|||||.||.||.|||||..|.||.||.
BPUM_3113 401 CAGGCGGTTCTGTGAATAACCCAGAAACGTCTTCCTATCACCTTGAGATT 450
BSNT_05291___ 451 TTCTCTCTTTATAAGGAGCATAACGATTCATTATGTGACCTGTTAAATGA 500
||.||.||.|||||.||.||.||.|||.|..|.|||||..||.|.||..|
BPUM_3113 451 TTTTCACTCTATAAAGAACACAATGATGCCCTTTGTGAGTTGATGAACCA 500
BSNT_05291___ 501 GTTTCAGTTAAACAGCAAAACGCTTGAACGGAAAAAAGGCTATATTACCT 550
.|||||..|.|||||.|||||.|||||.||||||||||||||.||.||.|
BPUM_3113 501 ATTTCATCTCAACAGTAAAACACTTGAGCGGAAAAAAGGCTACATCACAT 550
BSNT_05291___ 551 ATTTAAAAGAGGCTGAAAAGATTACAGAGTTTCTGAA-CGTAATTGGCGC 599
||.|.|||||.||.|||||.||.||.|| .||||.|| .||..|.||.||
BPUM_3113 551 ATATGAAAGAAGCCGAAAAAATCACTGA-ATTCTTAAGTGTTGTAGGTGC 599
BSNT_05291___ 600 TCACAATTCGCTTCTGCGATTTGAGGATGTCAGAATCGTCCGGGACATGA 649
.||.|||||.|||||.||.||.||.||.||..|.||||||||.||.|||.
BPUM_3113 600 GCATAATTCACTTCTTCGCTTCGAAGACGTTCGGATCGTCCGTGATATGC 649
BSNT_05291___ 650 GAAATTCGGTCAACCGCCTCGTCAATTGTGAAACAGCCAACTTAAACAAA 699
|.||.||.||.|||||.||||||||||||||||||||.|||||.||.|||
BPUM_3113 650 GGAACTCCGTGAACCGGCTCGTCAATTGTGAAACAGCAAACTTGAATAAA 699
BSNT_05291___ 700 ACGATCGGCGCATCGCTGAGACAGGTGGAAAATATTAAATACATCGATGA 749
|||||.||.||||||||..|.|||||.|||||.|||.|||.|||.|||||
BPUM_3113 700 ACGATTGGTGCATCGCTCCGTCAGGTCGAAAACATTCAATTCATTGATGA 749
BSNT_05291___ 750 AAGAATCGGCCTGGAGGCGCTGCCTGAAAAACTTCGGGAAATTGCGCAGC 799
||.|||.||.||.||.||.|||||.||.||.||.||.||||||||..|||
BPUM_3113 750 AAAAATTGGACTTGATGCCCTGCCAGATAAGCTGCGTGAAATTGCAAAGC 799
BSNT_05291___ 800 TTCGGATTGATTATCAGGAAGTGACGCTGAAAGAGCTGGGGGAAATGGTA 849
|..|..|.||.|||||.||.||.|||||.||.||.|||||.||||||||.
BPUM_3113 800 TAAGAGTCGACTATCAAGAGGTCACGCTAAAGGAACTGGGAGAAATGGTG 849
BSNT_05291___ 850 GCAAGCGGGAAAATCAGCAAATCAGGGATCAATCACAGGCTGAGAAAACT 899
|.||||||.||.||||||||||||||.||.||||||.|..|.|||||.||
BPUM_3113 850 GAAAGCGGTAAGATCAGCAAATCAGGCATTAATCACCGCTTAAGAAAGCT 899
BSNT_05291___ 900 TGACGAAATCGCAGAACAGCTGCGGACTGGGCAAACCGTCACTTTAAAAT 949
.||..||||.||||||||..|.||.|..||.|||.|.||.||..|.||||
BPUM_3113 900 AGATCAAATTGCAGAACAATTACGAAACGGACAAGCTGTTACACTCAAAT 949
BSNT_05291___ 950 AA 951
|.
BPUM_3113 950 AG 951
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