Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05291 and BPUM_3113

See DNA alignment / Visit BSNT_05291 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_05291___yvcL.1.24716.seq
#    -bsequence pep-align/BPUM_3113.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05291___yvcL-BPUM_3113.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05291___yvcL-BPUM_3113.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05291___yvcL
# 2: BPUM_3113
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     281/316 (88.9%)
# Similarity:   305/316 (96.5%)
# Gaps:           0/316 ( 0.0%)
# Score: 1443.0
# 
#
#=======================================

BSNT_05291___      1 MSFASETKKELTNLEVKDCCINAELSALIRMNGALSFTNRHLVLDVQTEN     50
                     ||||||||||||||:|||||..|||||||||||:|||:||.|:||:||||
BPUM_3113          1 MSFASETKKELTNLDVKDCCTKAELSALIRMNGSLSFSNRKLILDIQTEN     50

BSNT_05291___     51 AAIARRIYTLLKKQYDVSVELLVRKKMRLKKNNVYIVRFSENAKTILEDL    100
                     |||||||||||||:|||:||||||||||||||||||||..|.||||||||
BPUM_3113         51 AAIARRIYTLLKKKYDVTVELLVRKKMRLKKNNVYIVRLVERAKTILEDL    100

BSNT_05291___    101 KILGENFVFERSISKELVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEI    150
                     |||||.|||||:||:|||||||||||||||||||||||||||||||||||
BPUM_3113        101 KILGEQFVFERNISEELVKKRCCKRSYMRGAFLAGGSVNNPETSSYHLEI    150

BSNT_05291___    151 FSLYKEHNDSLCDLLNEFQLNSKTLERKKGYITYLKEAEKITEFLNVIGA    200
                     |||||||||:||:|:|:|.|||||||||||||||:||||||||||:|:||
BPUM_3113        151 FSLYKEHNDALCELMNQFHLNSKTLERKKGYITYMKEAEKITEFLSVVGA    200

BSNT_05291___    201 HNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLRQVENIKYIDE    250
                     |||||||||||||||||||||||||||||||||||||||||||||::|||
BPUM_3113        201 HNSLLRFEDVRIVRDMRNSVNRLVNCETANLNKTIGASLRQVENIQFIDE    250

BSNT_05291___    251 RIGLEALPEKLREIAQLRIDYQEVTLKELGEMVASGKISKSGINHRLRKL    300
                     :|||:|||:||||||:||:||||||||||||||.||||||||||||||||
BPUM_3113        251 KIGLDALPDKLREIAKLRVDYQEVTLKELGEMVESGKISKSGINHRLRKL    300

BSNT_05291___    301 DEIAEQLRTGQTVTLK    316
                     |:||||||.||.||||
BPUM_3113        301 DQIAEQLRNGQAVTLK    316


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