Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00304 and BSU01580

See Amino acid alignment / Visit BSNT_00304 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:18
# Commandline: needle
#    -asequence dna-align/BSNT_00304___ybaR.1.22522.seq
#    -bsequence dna-align/BSU01580___ybaR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00304___ybaR-BSU01580___ybaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00304___ybaR-BSU01580___ybaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00304___ybaR
# 2: BSU01580___ybaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1437
# Identity:    1421/1437 (98.9%)
# Similarity:  1421/1437 (98.9%)
# Gaps:           0/1437 ( 0.0%)
# Score: 7041.0
# 
#
#=======================================

BSNT_00304___      1 TTGAATGATAGTTTTACATTAAAACAGCAATGGTTCGGCAATATCCGAAA     50
                     ||||||.|||||||||||||||||||||||||||||||.|||||||||||
BSU01580___yb      1 TTGAATAATAGTTTTACATTAAAACAGCAATGGTTCGGGAATATCCGAAA     50

BSNT_00304___     51 AGACATTCTTGCTGGCATTTTAGTTGCGTTAGCATTAATTCCTGAAGCGA    100
                     |||||||||||||||||||||||||||||||||.|||||.||||||||||
BSU01580___yb     51 AGACATTCTTGCTGGCATTTTAGTTGCGTTAGCGTTAATACCTGAAGCGA    100

BSNT_00304___    101 TTGGCTTTTCTATTATAGCCGGTGTGGATCCGATGGTCGGTCTTTATGCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    101 TTGGCTTTTCTATTATAGCCGGTGTGGATCCGATGGTCGGTCTTTATGCG    150

BSNT_00304___    151 TCATTTTGTATAGCCATTATTATTTCTATTTTTGGCGGCAGACCTGGCAT    200
                     ||||||||.||||||||||||||||||||||||||.||||||||||||||
BSU01580___yb    151 TCATTTTGCATAGCCATTATTATTTCTATTTTTGGTGGCAGACCTGGCAT    200

BSNT_00304___    201 GATTTCAGCTGCGACAGGCTCAATGGCAGTCGTTATGGTGTCGCTGGTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    201 GATTTCAGCTGCGACAGGCTCAATGGCAGTCGTTATGGTGTCGCTGGTTG    250

BSNT_00304___    251 CTGATCATGGGCTTCAGTATTTATTTGCGGCTACGATTTTGACAGGTATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU01580___yb    251 CTGATCATGGGCTTCAGTATTTATTTGCGGCTACGATTTTGACAGGCATT    300

BSNT_00304___    301 ATTCAGGTGATTTTAGGTATCAGTAAAATTGCAAGATTAATGAAATTCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    301 ATTCAGGTGATTTTAGGTATCAGTAAAATTGCAAGATTAATGAAATTCAT    350

BSNT_00304___    351 CCCGCGTTCTGTGATGATCGGGTTTGTGAATGCGCTGGCGATCCTTATCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    351 CCCGCGTTCTGTGATGATCGGGTTTGTGAATGCGCTGGCGATCCTTATCT    400

BSNT_00304___    401 TCTCAGCGCAGCTTCCCCAGTTTGAAGGTGCTTCTTGGAGCATGTATGCG    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    401 TCTCTGCGCAGCTTCCCCAGTTTGAAGGTGCTTCTTGGAGCATGTATGCG    450

BSNT_00304___    451 ATGCTTGCCGGGTCGTTGGTTATTATTTATGTGCTGCCGAGATTTACGAC    500
                     ||||||||||||||||||||||||||||||||||||||.||.||||||||
BSU01580___yb    451 ATGCTTGCCGGGTCGTTGGTTATTATTTATGTGCTGCCAAGGTTTACGAC    500

BSNT_00304___    501 TGCTGTTCCGTCTCCGCTTGTGGCGATTATTGTGATGACAATAATTGCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU01580___yb    501 TGCTGTTCCGTCTCCGCTTGTGGCGATTATTGTGATGACAATTATTGCGG    550

BSNT_00304___    551 TCACTTTCCATGTGGATGTGCGGACGGTTGGTGATATGGGCAATATTTCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    551 TCACTTTCCATGTGGATGTGCGGACGGTTGGTGATATGGGCAATATTTCT    600

BSNT_00304___    601 AGTTCATTGCCTCATTTCTTAATCCCTGATGTTCCGTTTACCTTTGAAAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    601 AGTTCATTGCCTCATTTCTTAATCCCTGATGTTCCGTTTACCTTTGAAAC    650

BSNT_00304___    651 ACTGCAAATTATTTTTCCTTATTCAATTGCTTTAGCGTTTGTCGGGTTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    651 ACTGCAAATTATTTTTCCTTATTCAATTGCTTTAGCGTTTGTCGGGTTGC    700

BSNT_00304___    701 TTGAATCTTTGCTGACAGCACAGATTATTGATGAGATGACGGATACGGAC    750
                     ||||||||||||||||||||||||||||||||||.||||||||||||||.
BSU01580___yb    701 TTGAATCTTTGCTGACAGCACAGATTATTGATGAAATGACGGATACGGAT    750

BSNT_00304___    751 AGTGATAAAAATAAAGAGAGCCGCGGACAGGGAATTGCGAATATCGTGAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    751 AGTGATAAAAATAAAGAGAGCCGCGGACAGGGAATTGCGAATATCGTGAC    800

BSNT_00304___    801 TGGATTCTTTGGCGGAATGGCAGGCTGCGCTATGATCGGACAATCTGTCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    801 TGGATTCTTTGGCGGAATGGCAGGCTGCGCTATGATCGGACAATCTGTCA    850

BSNT_00304___    851 TTAATACAAAAGCGGGCGGTCGCGGACGTTTGTCAGCATTTGTTGCCGGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    851 TTAATACAAAAGCGGGCGGTCGCGGACGTTTGTCAGCATTTGTTGCCGGT    900

BSNT_00304___    901 GCTTTTCTGATGTTTTTAATTGCGGTGTTAAGTCATGTCGTGGTGAAAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    901 GCTTTTCTGATGTTTTTAATTGCGGTGTTAAGTCATGTCGTGGTGAAAAT    950

BSNT_00304___    951 CCCAATGGCGGCGTTAGTAGCTGTAATGGTTATGGTGTCTGTCGGCACTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    951 CCCAATGGCGGCGTTAGTAGCTGTAATGGTTATGGTGTCTGTCGGCACTT   1000

BSNT_00304___   1001 TTGATTGGTCTTCCTTAAAAGGTCTCAAAAAAGCGCCGCTCACGGACTCG   1050
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU01580___yb   1001 TTGATTGGTCTTCTTTAAAAGGTCTCAAAAAAGCGCCGCTCACGGACTCG   1050

BSNT_00304___   1051 ATTGTCATGGTTGTGACTGTGGTTACGGTTGTTGTGACGGATGACTTATC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb   1051 ATTGTCATGGTTGTGACTGTGGTTACGGTTGTTGTGACGGATGACTTATC   1100

BSNT_00304___   1101 TAAGGGTGTATTTGTCGGTGTTCTTTTAAGTGCCGTGTTCTTTGTGGCAA   1150
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01580___yb   1101 TAAGGGTGTATTTGTCGGTGTTCTTTTAAGTGCCGTGTTCTTTGTAGCAA   1150

BSNT_00304___   1151 AAATCTCGAAGCTGAAAATCGTTTCTCATGCAGAGGATCAAAAGCTTAGA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb   1151 AAATCTCGAAGCTGAAAATCGTTTCTCATGCAGAGGATCAAAAGCTTAGA   1200

BSNT_00304___   1201 ACGTATCAAGTGAAGGGGCAAATCTTTTTTGCGTCAGTGACTGATCTTAC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb   1201 ACGTATCAAGTGAAGGGGCAAATCTTTTTTGCGTCAGTGACTGATCTTAC   1250

BSNT_00304___   1251 GAATGCGTTTATATATCAAGAGGATATTGAGCGGGTTGTGATTGACTTAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb   1251 GAATGCGTTTATATATCAAGAGGATATTGAGCGGGTTGTGATTGACTTAA   1300

BSNT_00304___   1301 CTGAAGCTCACGTATGGGACGATTCTGGTGCGGCCGCACTTGATAAGATT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb   1301 CTGAAGCTCACGTATGGGACGATTCTGGTGCGGCCGCACTTGATAAGATT   1350

BSNT_00304___   1351 GTTGCGAAGTTCAAGGAACAAGGCATTGAAGCTGAGTTAAAAGGTTTGAA   1400
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU01580___yb   1351 GTTGCGAAGTTTAAGGAACAAGGCATTGAAGCTGAGTTAAAAGGTTTGAA   1400

BSNT_00304___   1401 TAAAGCGAGTAAATCTCTAATGAAACAGATGGCATAA   1437
                     |||||||||||||||||||||||||||||||||||||
BSU01580___yb   1401 TAAAGCGAGTAAATCTCTAATGAAACAGATGGCATAA   1437


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