Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00304 and BSU01580

See DNA alignment / Visit BSNT_00304 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:18
# Commandline: needle
#    -asequence pep-align/BSNT_00304___ybaR.1.22522.seq
#    -bsequence pep-align/BSU01580___ybaR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00304___ybaR-BSU01580___ybaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00304___ybaR-BSU01580___ybaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00304___ybaR
# 2: BSU01580___ybaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity:     477/478 (99.8%)
# Similarity:   478/478 (100.0%)
# Gaps:           0/478 ( 0.0%)
# Score: 2338.0
# 
#
#=======================================

BSNT_00304___      1 MNDSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYA     50
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb      1 MNNSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYA     50

BSNT_00304___     51 SFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb     51 SFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGI    100

BSNT_00304___    101 IQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    101 IQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYA    150

BSNT_00304___    151 MLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNIS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    151 MLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNIS    200

BSNT_00304___    201 SSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTD    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    201 SSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTD    250

BSNT_00304___    251 SDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKAGGRGRLSAFVAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    251 SDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKAGGRGRLSAFVAG    300

BSNT_00304___    301 AFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDS    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    301 AFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDS    350

BSNT_00304___    351 IVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLR    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    351 IVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLR    400

BSNT_00304___    401 TYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKI    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01580___yb    401 TYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKI    450

BSNT_00304___    451 VAKFKEQGIEAELKGLNKASKSLMKQMA    478
                     ||||||||||||||||||||||||||||
BSU01580___yb    451 VAKFKEQGIEAELKGLNKASKSLMKQMA    478


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