Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00684 and BSU03890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:00
# Commandline: needle
# -asequence dna-align/BSNT_00684___gabR.1.22522.seq
# -bsequence dna-align/BSU03890___gabR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00684___gabR-BSU03890___gabR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00684___gabR-BSU03890___gabR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00684___gabR
# 2: BSU03890___gabR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1440
# Identity: 1431/1440 (99.4%)
# Similarity: 1431/1440 (99.4%)
# Gaps: 0/1440 ( 0.0%)
# Score: 7119.0
#
#
#=======================================
BSNT_00684___ 1 ATGGATATCACAATTACACTCGATCGTTCAGAGCGAGCCGATTATATCTA 50
|||||||||||.||||||||||||||||||||.|.|||||||||||||||
BSU03890___ga 1 ATGGATATCACGATTACACTCGATCGTTCAGAACAAGCCGATTATATCTA 50
BSNT_00684___ 51 TCAGCAAATTTATCAAAAGCTGAAAAAAGAAATCCTCAGCCGCAATCTGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 51 TCAGCAAATTTATCAAAAGCTGAAAAAAGAAATCCTCAGCCGCAATCTGC 100
BSNT_00684___ 101 TGCCGCACTCGAAGGTTCCCTCCAAGCGGGAGCTGGCTGAAAATCTCAAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 101 TGCCGCACTCGAAGGTTCCCTCCAAGCGGGAGCTGGCTGAAAATCTCAAG 150
BSNT_00684___ 151 GTCAGCGTAAATTCAGTGAATTCAGCCTATCAGCAGCTGCTGGCTGAAGG 200
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU03890___ga 151 GTCAGCGTAAATTCAGTGAATTCAGCCTATCAGCAGCTGCTGGCTGAGGG 200
BSNT_00684___ 201 GTATTTGTACGCCATTGAACGAAAGGGTTTCTTCGTGGAGGAACTAGACA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 201 GTATTTGTACGCCATTGAACGAAAGGGTTTCTTCGTGGAGGAACTAGACA 250
BSNT_00684___ 251 TGTTTTCCGCCGAGGAGCACCCTCCATTTGCACTGCCGGATGATCTAAAA 300
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU03890___ga 251 TGTTTTCCGCCGAGGAGCACCCTCCATTTGCACTGCCGGATGACCTAAAA 300
BSNT_00684___ 301 GAGATTCACATCGACCAGAGCGATTGGATATCGTTTTCACACATGAGTTC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 301 GAGATTCACATCGACCAGAGCGATTGGATATCGTTTTCACACATGAGTTC 350
BSNT_00684___ 351 CGATACAGACCATTTTCCGATCAAAAGCTGGTTCCGCTGCGAGCAAAAAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 351 CGATACAGACCATTTTCCGATCAAAAGCTGGTTCCGCTGCGAGCAAAAAG 400
BSNT_00684___ 401 CGGCCTCCCGCTCATACCGCAGGCTCGGCGATATGTCACATCCGCAAGGG 450
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU03890___ga 401 CGGCCTCCCGCTCATACCGCACGCTCGGCGATATGTCACATCCGCAAGGG 450
BSNT_00684___ 451 ATATATGAAGTGAGAGCGGCCATTACGAGGCTCATTTCCCTGACGAGGGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 451 ATATATGAAGTGAGAGCGGCCATTACGAGGCTCATTTCCCTGACGAGGGG 500
BSNT_00684___ 501 TGTAAAATGCAGGCCGGAACAAATGATCATAGGGGCAGGCACACAGGTGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 501 TGTAAAATGCAGGCCGGAACAAATGATCATAGGGGCAGGCACACAGGTGC 550
BSNT_00684___ 551 TCATGCAGCTGTTGACTGAGCTTTTACCCAAGGAAGCCGTGTATGCGATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 551 TCATGCAGCTGTTGACTGAGCTTTTACCCAAGGAAGCCGTGTATGCGATG 600
BSNT_00684___ 601 GAGGAGCCTGGCTACAGGCGCATGTATCAGCTTTTGAAGAATGCCGGAAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 601 GAGGAGCCTGGCTACAGGCGCATGTATCAGCTTTTGAAGAATGCCGGAAA 650
BSNT_00684___ 651 ACAAGTAAAGACGATCATGCTGGATGAAAAAGGCATGTCGATTGCTGAAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 651 ACAAGTAAAGACGATCATGCTGGATGAAAAAGGCATGTCGATTGCTGAAA 700
BSNT_00684___ 701 TCACCAGACAGCAGCCAGATGTGCTGGTGACCACCCCGTCGCATCAGTTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 701 TCACCAGACAGCAGCCAGATGTGCTGGTGACCACCCCGTCGCATCAGTTT 750
BSNT_00684___ 751 CCGTCCGGAACGATTATGCCTGTATCCAGAAGAATTCAGCTGCTGAACTG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 751 CCGTCCGGAACGATTATGCCTGTATCCAGAAGAATTCAGCTGCTGAACTG 800
BSNT_00684___ 801 GGCAGCCGAGGAGCCGCGCCGATATATCATTGAGGACGATTATGATAGTG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 801 GGCAGCCGAGGAGCCGCGCCGATATATCATTGAGGACGATTATGATAGTG 850
BSNT_00684___ 851 AATTCACATATGATGTAGACAGTATTCCGGCGCTGCAAAGCCTCGACCGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 851 AATTCACATATGATGTAGACAGTATTCCGGCGCTGCAAAGCCTCGACCGT 900
BSNT_00684___ 901 TTTCAAAATGTCATCTATATGGGAACCTTTTCAAAGTCCCTTCTCCCCGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 901 TTTCAAAATGTCATCTATATGGGAACCTTTTCAAAGTCCCTTCTCCCCGG 950
BSNT_00684___ 951 CTTGCGGATCAGCTATATGGTGTTGCCGCCTGAGCTGTTGAGGGCATACA 1000
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 951 CTTACGGATCAGCTATATGGTGTTGCCGCCTGAGCTGTTGAGGGCATACA 1000
BSNT_00684___ 1001 AACAGCGGGGCTATGATCTGCAGACTTGCTCATCACTCACACAGCTCACC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1001 AACAGCGGGGCTATGATCTGCAGACTTGCTCATCACTCACACAGCTCACC 1050
BSNT_00684___ 1051 CTGCAGGAATTTATCGAGTCTGGTGAATATCAGAAGCATATAAAAAAAAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1051 CTGCAGGAATTTATCGAGTCTGGTGAATATCAGAAGCATATAAAAAAAAT 1100
BSNT_00684___ 1101 GAAGCAGCATTATAAAGAAAAGAGAGAACGCCTGATCACCGCTTTAGAAG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1101 GAAGCAGCATTATAAAGAAAAGAGAGAACGCCTGATCACCGCTTTAGAAG 1150
BSNT_00684___ 1151 CAGAGTTCAGCGGAGAGGTTACCGTAAAAGGGGCAAATGCGGGGCTGCAT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1151 CAGAGTTCAGCGGAGAGGTTACCGTAAAAGGGGCAAATGCGGGGCTGCAT 1200
BSNT_00684___ 1201 TTTGTTACCGAATTTGATACCAGGCGCACCGAACAAGACATCCTGTCACA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1201 TTTGTTACCGAATTTGATACCAGGCGCACCGAACAAGACATCCTGTCACA 1250
BSNT_00684___ 1251 TGCTGCCGGGCTGCAGCTTGAAATATTCGGAATGAGCCGATTTAACTTGA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1251 TGCTGCCGGGCTGCAGCTTGAAATATTCGGAATGAGCCGATTTAACTTGA 1300
BSNT_00684___ 1301 AGGAAAACAAGCGGCAAACGGGCAGGCCTGCTCTCATTATCGGCTTTGCA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1301 AGGAAAACAAGCGGCAAACGGGCAGGCCTGCTCTCATTATCGGCTTTGCA 1350
BSNT_00684___ 1351 CGGCTGAAGGAAGAAGATGTTCAGGCGGGTGTGCAGCGGCTTTTCAAAGC 1400
||||||||||||||||||.||||||.||||||||||||||||||||||||
BSU03890___ga 1351 CGGCTGAAGGAAGAAGATATTCAGGAGGGTGTGCAGCGGCTTTTCAAAGC 1400
BSNT_00684___ 1401 GGTTTACGGACATAAAAAAATCCCCGTTACAGGGGATTGA 1440
||||||||||||||||||||||||||||||||||||||||
BSU03890___ga 1401 GGTTTACGGACATAAAAAAATCCCCGTTACAGGGGATTGA 1440
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