Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00851 and BSU04930

See Amino acid alignment / Visit BSNT_00851 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:17
# Commandline: needle
#    -asequence dna-align/BSNT_00851___yddD.1.22522.seq
#    -bsequence dna-align/BSU04930___yddD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00851___yddD-BSU04930___yddD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00851___yddD-BSU04930___yddD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00851___yddD
# 2: BSU04930___yddD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     499/525 (95.0%)
# Similarity:   499/525 (95.0%)
# Gaps:           0/525 ( 0.0%)
# Score: 2391.0
# 
#
#=======================================

BSNT_00851___      1 ATGGGGCGTCTGGTGTTCAACTACCGGAAGGCAATGAGAGAGCCGAAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04930___yd      1 ATGGGGCGTCTGGTGTTCAACTACCGGAAGGCAATGAGAGAGCCGAAAAA     50

BSNT_00851___     51 GATTCAGCAATTAACCGAAAATTATTCGTTACCCTTTGCAGTTGAGTTAA    100
                     .||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU04930___yd     51 AATCCAACAATTAACCGAAAATTATTCGTTACCCTTTGCAGTTGAGTTAA    100

BSNT_00851___    101 TACCGGCTATTAACTATTTCATTTTTGTTGGCCTATGCTTTGGGTTCTGG    150
                     ||||||||||||||||||||||||||||||||.||||||||||.||||||
BSU04930___yd    101 TACCGGCTATTAACTATTTCATTTTTGTTGGCTTATGCTTTGGATTCTGG    150

BSNT_00851___    151 TACGGCGTGAGGATGATTTTTCCTCACGCTTTTGATAACAGTTTCATCAT    200
                     ||||||||||||||||||||.||||||||||||||||||||||.|.||||
BSU04930___yd    151 TACGGCGTGAGGATGATTTTCCCTCACGCTTTTGATAACAGTTACGTCAT    200

BSNT_00851___    201 CGTGATTTTTGGAATACCGATTTTTTTCACAATGCTTGTTACGAAAATAA    250
                     .|||||||||||.|||||..|||||||.||.||||||||.||||||||||
BSU04930___yd    201 TGTGATTTTTGGGATACCATTTTTTTTAACGATGCTTGTAACGAAAATAA    250

BSNT_00851___    251 AGCCGGAAGGCAAAAACATCTATTTATACTTCATTGATTTTGCAAAGTAT    300
                     |||||||||||||||||||||||.||||.|||.|||||||.|||||||||
BSU04930___yd    251 AGCCGGAAGGCAAAAACATCTATATATATTTCTTTGATTTCGCAAAGTAT    300

BSNT_00851___    301 TACTTCTTCATCAAGCTTCCACAAAAGAAGTTTTGCAATGACCGAAGGGT    350
                     |||||||||||||||||||||||||||||||.|||||||||.||||.|.|
BSU04930___yd    301 TACTTCTTCATCAAGCTTCCACAAAAGAAGTATTGCAATGATCGAAAGAT    350

BSNT_00851___    351 TGATTTAAGTAATGAAAAACAAATTGAGTTTCGAAAACTTGTGAAGGTGG    400
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU04930___yd    351 TGATTTAAGTAACGAAAAACAAATTGAGTTTCGAAAACTTGTGAAGGTGG    400

BSNT_00851___    401 TGGATTATTCGGATGAGACTAAAAACGCCTATGAAGGCAATACACAAGAA    450
                     ||||||||||..||||||||||||||||||||||||||||||||||||||
BSU04930___yd    401 TGGATTATTCAAATGAGACTAAAAACGCCTATGAAGGCAATACACAAGAA    450

BSNT_00851___    451 TTTGCTGTTAACAAGAACGGGCGACGTGTGGGCGTACTACCGAATAAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04930___yd    451 TTTGCTGTTAACAAGAACGGGCGACGTGTGGGCGTACTACCGAATAAAAA    500

BSNT_00851___    501 GCAATTCGATTCCTATGCAAAATAA    525
                     |||||||||||||||||||||||||
BSU04930___yd    501 GCAATTCGATTCCTATGCAAAATAA    525


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