Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00851 and BSU04930

See DNA alignment / Visit BSNT_00851 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:17
# Commandline: needle
#    -asequence pep-align/BSNT_00851___yddD.1.22522.seq
#    -bsequence pep-align/BSU04930___yddD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00851___yddD-BSU04930___yddD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00851___yddD-BSU04930___yddD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00851___yddD
# 2: BSU04930___yddD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity:     164/174 (94.3%)
# Similarity:   171/174 (98.3%)
# Gaps:           0/174 ( 0.0%)
# Score: 889.0
# 
#
#=======================================

BSNT_00851___      1 MGRLVFNYRKAMREPKKIQQLTENYSLPFAVELIPAINYFIFVGLCFGFW     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04930___yd      1 MGRLVFNYRKAMREPKKIQQLTENYSLPFAVELIPAINYFIFVGLCFGFW     50

BSNT_00851___     51 YGVRMIFPHAFDNSFIIVIFGIPIFFTMLVTKIKPEGKNIYLYFIDFAKY    100
                     ||||||||||||||::|||||||.|.|||||||||||||||:||.|||||
BSU04930___yd     51 YGVRMIFPHAFDNSYVIVIFGIPFFLTMLVTKIKPEGKNIYIYFFDFAKY    100

BSNT_00851___    101 YFFIKLPQKKFCNDRRVDLSNEKQIEFRKLVKVVDYSDETKNAYEGNTQE    150
                     ||||||||||:||||::||||||||||||||||||||:||||||||||||
BSU04930___yd    101 YFFIKLPQKKYCNDRKIDLSNEKQIEFRKLVKVVDYSNETKNAYEGNTQE    150

BSNT_00851___    151 FAVNKNGRRVGVLPNKKQFDSYAK    174
                     ||||||||||||||||||||||||
BSU04930___yd    151 FAVNKNGRRVGVLPNKKQFDSYAK    174


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