Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00890 and BSU05160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:19
# Commandline: needle
# -asequence dna-align/BSNT_00890.1.22522.seq
# -bsequence dna-align/BSU05160___ydeD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00890-BSU05160___ydeD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00890-BSU05160___ydeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00890
# 2: BSU05160___ydeD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 960
# Identity: 507/960 (52.8%)
# Similarity: 507/960 (52.8%)
# Gaps: 438/960 (45.6%)
# Score: 2475.0
#
#
#=======================================
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 1 ATGAATACTTCCAATAGAAGAATGGGATTGTTCTATGTTATCACAGGGGC 50
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 51 GACATGTTGGGGGATTGGAGGCACAGTAGCCAAAAAACTTTTTCAAGAAT 100
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 101 ATCAAATTGATGTCAATTGGCTTGTAACGACACGCTTGCTTACGGCTGGA 150
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 151 ATGTTACTTTTAATGCTGCAACTGTTCAGAAAGGATCGTTCCCAGGTTAT 200
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 201 TGAGGTGTGGAAACACAAAGCGTCGGCTGGCCAGCTTCTAATTTTTGGCC 250
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 251 TATTGGGAATGCTAGCTGTGCAGTACACATATATGGCATCCATTCAACAT 300
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 301 GGGAATGCTGCCGTTGCTACGTTATTGCAATATTTATCCCCAGTAATCGT 350
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 351 CATTATCTACACGCTGTTGCGAAAACAAACGGTTCTTACCAAACAAGATA 400
BSNT_00890 1 --------------------------------------TTGTTAACAAAT 12
||||||||||||
BSU05160___yd 401 TCATAACTGTTGTACTTGCTTTAGTGGGTTGCTTTTTTTTGTTAACAAAT 450
BSNT_00890 13 GGTTCAATATCTCAACTTTCAGTGCCGGCAGCTGCAGTAGTATGGGGAGT 62
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU05160___yd 451 GGTTCAATGTCTCAACTTTCAGTGCCGGCAGCTGCAGTAGTATGGGGAGT 500
BSNT_00890 63 TTTATCAGGATTCGCGGCAGCTTTTTATACTTTATATGCCGTTGGTTTAT 112
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU05160___yd 501 TTTATCAGGATTCGCGGCAGCTTTTTATACTTTGTATGCCGTTGGTTTAT 550
BSNT_00890 113 TAAATAAATTTGATTCTCTTGTCGTTGTAGGTTGGGCTATGATTATTGGC 162
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd 551 TAAATAAATTTGATTCTCTTGTCGTTGTAGGTTGGGCTATGATTATTGGC 600
BSNT_00890 163 GGTTTTGCATTGGGTTTTATCCATCCGCCATGGCAACTGGATTTTCAACG 212
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd 601 GGTTTTGCATTGGGTTTTATCCATCCGCCATGGCAACTGGATTTTCAACG 650
BSNT_00890 213 ATTAACTGCTGAGGCGTATGCATATATTTTATTTGTGATATTATTTGGAA 262
|||||||||||||||||||||||||||.|||||.||||||||||||||||
BSU05160___yd 651 ATTAACTGCTGAGGCGTATGCATATATCTTATTCGTGATATTATTTGGAA 700
BSNT_00890 263 CAATGATTGCGTTCTGGTTCTTCATAAAAAGCTTGGAAAGCCTTTCTCCC 312
|||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU05160___yd 701 CAATGATTGCGTTCTGGTTCTTCATAAAAAGCTTGGAAAGCCTCTCTCCA 750
BSNT_00890 313 AAAGAAACAAGCCTATTAGGCAGTTTAGAACCTCTATCCGCTGTTGTAAC 362
|||||||||||||||.||||||||.||||.||||||||.|||||||||||
BSU05160___yd 751 AAAGAAACAAGCCTACTAGGCAGTCTAGAGCCTCTATCAGCTGTTGTAAC 800
BSNT_00890 363 AACTGTCGTTTGGTTAAAAGCGCCATTTGGTTCTTTTCAATGGATTGGTG 412
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd 801 AACTGTCGTTTGGTTAAAAGCGCCATTTGGTTCTTTTCAATGGATTGGTG 850
BSNT_00890 413 CTATTTGTATTATAGGAATAACTTTAATATTGGCTTTAAATAAAGAGCCT 462
||||||||||||||||.|||||||||||||||||||||.|||||||||||
BSU05160___yd 851 CTATTTGTATTATAGGGATAACTTTAATATTGGCTTTACATAAAGAGCCT 900
BSNT_00890 463 TCTGTGCAGAGTGAAAAGTCGATATTAAAGATTAGGAATCATGCAAATCG 512
|||.||.||||||||||.||||||||||||||||||||||||||||||||
BSU05160___yd 901 TCTATGGAGAGTGAAAAATCGATATTAAAGATTAGGAATCATGCAAATCG 950
BSNT_00890 513 GGATATATAG 522
||||||||||
BSU05160___yd 951 GGATATATAG 960
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