Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00890 and BSU05160

See DNA alignment / Visit BSNT_00890 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:19
# Commandline: needle
#    -asequence pep-align/BSNT_00890.1.22522.seq
#    -bsequence pep-align/BSU05160___ydeD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00890-BSU05160___ydeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00890-BSU05160___ydeD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00890
# 2: BSU05160___ydeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     168/319 (52.7%)
# Similarity:   173/319 (54.2%)
# Gaps:         146/319 (45.8%)
# Score: 863.0
# 
#
#=======================================

BSNT_00890         0 --------------------------------------------------      0
                                                                       
BSU05160___yd      1 MNTSNRRMGLFYVITGATCWGIGGTVAKKLFQEYQIDVNWLVTTRLLTAG     50

BSNT_00890         0 --------------------------------------------------      0
                                                                       
BSU05160___yd     51 MLLLMLQLFRKDRSQVIEVWKHKASAGQLLIFGLLGMLAVQYTYMASIQH    100

BSNT_00890         1 ----------------------------------------------MLTN      4
                                                                   :|||
BSU05160___yd    101 GNAAVATLLQYLSPVIVIIYTLLRKQTVLTKQDIITVVLALVGCFFLLTN    150

BSNT_00890         5 GSISQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIG     54
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd    151 GSMSQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIG    200

BSNT_00890        55 GFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSP    104
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd    201 GFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSP    250

BSNT_00890       105 KETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALNKEP    154
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
BSU05160___yd    251 KETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALHKEP    300

BSNT_00890       155 SVQSEKSILKIRNHANRDI    173
                     |::||||||||||||||||
BSU05160___yd    301 SMESEKSILKIRNHANRDI    319


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