Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03893 and BSU26820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_03893___yrpD.1.22522.seq
# -bsequence dna-align/BSU26820___yrpD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03893___yrpD-BSU26820___yrpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03893___yrpD-BSU26820___yrpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03893___yrpD
# 2: BSU26820___yrpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 727
# Identity: 697/727 (95.9%)
# Similarity: 697/727 (95.9%)
# Gaps: 20/727 ( 2.8%)
# Score: 3435.0
#
#
#=======================================
BSNT_03893___ 1 ATGATAGGGGGAAATAATGATGATGAAAAAAGGTCTGCTTGCGGGTGCGC 50
|||||||||||||||||||||||||||||||
BSU26820___yr 1 -------------------ATGATGAAAAAAGGTCTGCTTGCGGGTGCGC 31
BSNT_03893___ 51 TTACGGCAACCGTGC-TTTTGGCACATGTGCAGTAGATGTGCCGGGTATT 99
||||||||||||||| ||||||||||||||||||||||||.|||||||||
BSU26820___yr 32 TTACGGCAACCGTGCTTTTTGGCACATGTGCAGTAGATGTACCGGGTATT 81
BSNT_03893___ 100 ATTAGTCCAAAAACCGCAGAAGCTGCATCACAGCTAACTGATGGAATCGG 149
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 82 ATTAGTCCAAAAACCGCAGAAGCTGCATCACAGCTAACTGATGGAATCGG 131
BSNT_03893___ 150 CGGGAGGGCTTACTTGAACAGTAATGGTGCCATTCTTGTTACGAAAATCC 199
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 132 CGGGAGGGCTTACTTGAACAGTAATGGTGCCATTCTTGTTACGAAAATCC 181
BSNT_03893___ 200 AGCTTCCTAGCTCCACTCAGGTTTCAAATGGGACAGCCTACATCTACTCT 249
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 182 AGCTTCCTAGCTCCACTCAGGTTTCAAATGGGACAGCCTACATCTACTCT 231
BSNT_03893___ 250 GGTTTTAGCGGAGGCACAGAATCCGATATTGGGCTTCAGTACAGTGATAA 299
|||||||||||||||||||||||||||||.|||.||||||||||||||||
BSU26820___yr 232 GGTTTTAGCGGAGGCACAGAATCCGATATCGGGTTTCAGTACAGTGATAA 281
BSNT_03893___ 300 ATATAATGTATGGAAACCATATATGAAAGTTGGTTCAAAAGGACAGGATC 349
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU26820___yr 282 ATATAATGTATGGAAACCATATATGAAAGTCGGTTCAAAAGGACAGGATC 331
BSNT_03893___ 350 AGGTTCAGTACCTCGAAGGAGGAAGCCAATTCACGAATACGAAAGGCTTC 399
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 332 AGGTTCAGTACCTCGAAGGAGGAAGCCAATTCACGAATACGAAAGGCTTC 381
BSNT_03893___ 400 CGTCCCGGCAGCACCGTACAACTTACCATCTACAAAAACCTTAACGGCAA 449
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 382 CGTCCCGGCAGCACCGTACAACTTACCATCTACAAAAACCTTAACGGCAA 431
BSNT_03893___ 450 TACCCGCGCTACATACTGGGGCACGAACAATGCCGGATACAACGGCCGTC 499
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 432 TACCCGCGCTACATACTGGGGCACGAACAATGCCGGATACAACGGCCGTC 481
BSNT_03893___ 500 TCATTTCAGAAATCAGCAAAACAAATGTCGGCTCCATCTCCAAATGGAAA 549
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU26820___yr 482 TCATTTCAGAAATCAGCAAAACAAATGTCGGCTCCATCTCAAAATGGAAA 531
BSNT_03893___ 550 GCGCTTGCTACAGTTGCTACAACAGGTTCACGCCAATCTATCAAATCAAA 599
|||||.|||||||||||.||||||||.|||||||||||||||||||||||
BSU26820___yr 532 GCGCTCGCTACAGTTGCAACAACAGGGTCACGCCAATCTATCAAATCAAA 581
BSNT_03893___ 600 TTTTTCAACATCTTTTACAAACATCACCATCGACAACAAAGCAATAACAC 649
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 582 CTTTTCAACATCTTTTACAAACATCACCATCGACAACAAAGCAATAACAC 631
BSNT_03893___ 650 CTGTAATTGATACACAAGACTTCGCTAAAGTAACAGTCTCAGGCAACAGT 699
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr 632 CTGTAATTGATACACAAGACTTCGCTAAAGTAACAGTCTCAGGCAACAGT 681
BSNT_03893___ 700 GTCAGTTTATCCGTTGTGAAAAATTAA 726
|||||||||||||||||.|||||||||
BSU26820___yr 682 GTCAGTTTATCCGTTGTCAAAAATTAA 708
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