Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03893 and BSU26820

See DNA alignment / Visit BSNT_03893 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_03893___yrpD.1.22522.seq
#    -bsequence pep-align/BSU26820___yrpD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03893___yrpD-BSU26820___yrpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03893___yrpD-BSU26820___yrpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03893___yrpD
# 2: BSU26820___yrpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     220/241 (91.3%)
# Similarity:   221/241 (91.7%)
# Gaps:           6/241 ( 2.5%)
# Score: 1112.0
# 
#
#=======================================

BSNT_03893___      1 MIGGNNDDEKRSACGCAYGNRAFGTCAVDVPGIISPKTAEAASQLTDGIG     50
                           ..:|....|.......||||||||||||||||||||||||||||
BSU26820___yr      1 ------MMKKGLLAGALTATVLFGTCAVDVPGIISPKTAEAASQLTDGIG     44

BSNT_03893___     51 GRAYLNSNGAILVTKIQLPSSTQVSNGTAYIYSGFSGGTESDIGLQYSDK    100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU26820___yr     45 GRAYLNSNGAILVTKIQLPSSTQVSNGTAYIYSGFSGGTESDIGFQYSDK     94

BSNT_03893___    101 YNVWKPYMKVGSKGQDQVQYLEGGSQFTNTKGFRPGSTVQLTIYKNLNGN    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr     95 YNVWKPYMKVGSKGQDQVQYLEGGSQFTNTKGFRPGSTVQLTIYKNLNGN    144

BSNT_03893___    151 TRATYWGTNNAGYNGRLISEISKTNVGSISKWKALATVATTGSRQSIKSN    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26820___yr    145 TRATYWGTNNAGYNGRLISEISKTNVGSISKWKALATVATTGSRQSIKSN    194

BSNT_03893___    201 FSTSFTNITIDNKAITPVIDTQDFAKVTVSGNSVSLSVVKN    241
                     |||||||||||||||||||||||||||||||||||||||||
BSU26820___yr    195 FSTSFTNITIDNKAITPVIDTQDFAKVTVSGNSVSLSVVKN    235


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