Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04003 and BSU27590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_04003___yrvI.1.22522.seq
# -bsequence dna-align/BSU27590___yrvI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04003___yrvI-BSU27590___yrvI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04003___yrvI-BSU27590___yrvI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04003___yrvI
# 2: BSU27590___yrvI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 395/441 (89.6%)
# Similarity: 395/441 (89.6%)
# Gaps: 42/441 ( 9.5%)
# Score: 1959.0
#
#
#=======================================
BSNT_04003___ 1 ATGAGATTAGTTGTTCAGCGAGTAACAGAAGCAAGCGTTACAGTGGACGA 50
||||||||
BSU27590___yr 1 ------------------------------------------GTGGACGA 8
BSNT_04003___ 51 AGAGGTCGTCGGCCAAATTGGACAAGGCCTCATGGTGCTGGTCGGCATCA 100
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27590___yr 9 AGAGGTCGTCGGCCAAATTGGACAAGGCCTTATGGTGCTGGTCGGCATCA 58
BSNT_04003___ 101 CTCATGATGATACAGAAGATGATGCAGCTTATTTAGCCGATAAAGTTGTC 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr 59 CTCACGATGATACAGAAGATGATGCAGCTTATTTAGCCGATAAAGTTGTC 108
BSNT_04003___ 151 AATCTCCGTATTTTCGATGACAGTGAAGGAAAAATGAATCTGTCTCTTGT 200
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27590___yr 109 AATCTCCGTATTTTCGATGACAGTGAAGGGAAAATGAATCTGTCTCTTGT 158
BSNT_04003___ 201 AGATATAGGAGGAGAGATTTTATCCGTCTCACAGTTTACGCTTTATGGAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr 159 AGATATAGGAGGAGAGATTTTATCCGTCTCACAGTTTACGCTTTATGGAG 208
BSNT_04003___ 251 ATACGAAAAAAGGGCGCCGGCCGAACTACATGAACGCGGCCAAACCTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr 209 ATACGAAAAAAGGGCGCCGGCCGAACTACATGAACGCGGCCAAACCTGAT 258
BSNT_04003___ 301 AAAGCTTTAGGTCTTTATGAAAAATGGAATGACCTGCTTCGTGAAAAAGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr 259 AAAGCTTTAGGTCTTTATGAAAAATGGAATGACCTGCTTCGTGAAAAAGG 308
BSNT_04003___ 351 AATCAAAGTGGAGACCGGAACGTTTGGAGCAATGATGGATGTTCAGCTTA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr 309 AATCAAAGTGGAGACCGGAACGTTTGGAGCAATGATGGATGTTCAGCTTA 358
BSNT_04003___ 401 CAAACTCCGGACCGGTTACGCTCATTATGGATTCAAAATAA 441
||||||||||||||||.||||||||||||||||||||||||
BSU27590___yr 359 CAAACTCCGGACCGGTCACGCTCATTATGGATTCAAAATAA 399
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