Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04003 and BSU27590

See DNA alignment / Visit BSNT_04003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence pep-align/BSNT_04003___yrvI.1.22522.seq
#    -bsequence pep-align/BSU27590___yrvI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04003___yrvI-BSU27590___yrvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04003___yrvI-BSU27590___yrvI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04003___yrvI
# 2: BSU27590___yrvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     131/146 (89.7%)
# Similarity:   132/146 (90.4%)
# Gaps:          14/146 ( 9.6%)
# Score: 671.0
# 
#
#=======================================

BSNT_04003___      1 MRLVVQRVTEASVTVDEEVVGQIGQGLMVLVGITHDDTEDDAAYLADKVV     50
                                   :|||||||||||||||||||||||||||||||||||
BSU27590___yr      1 --------------MDEEVVGQIGQGLMVLVGITHDDTEDDAAYLADKVV     36

BSNT_04003___     51 NLRIFDDSEGKMNLSLVDIGGEILSVSQFTLYGDTKKGRRPNYMNAAKPD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr     37 NLRIFDDSEGKMNLSLVDIGGEILSVSQFTLYGDTKKGRRPNYMNAAKPD     86

BSNT_04003___    101 KALGLYEKWNDLLREKGIKVETGTFGAMMDVQLTNSGPVTLIMDSK    146
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU27590___yr     87 KALGLYEKWNDLLREKGIKVETGTFGAMMDVQLTNSGPVTLIMDSK    132


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