Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04092 and BSU28160

See Amino acid alignment / Visit BSNT_04092 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_04092.1.22522.seq
#    -bsequence dna-align/BSU28160___hemX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04092-BSU28160___hemX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04092-BSU28160___hemX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04092
# 2: BSU28160___hemX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity:     713/831 (85.8%)
# Similarity:   713/831 (85.8%)
# Gaps:         111/831 (13.4%)
# Score: 3537.0
# 
#
#=======================================

BSNT_04092         0 --------------------------------------------------      0
                                                                       
BSU28160___he      1 ATGATTGATACTGCAATGGCAAGACTTAATGAGGGGACAATCGTCATTTA     50

BSNT_04092         0 --------------------------------------------------      0
                                                                       
BSU28160___he     51 CGCGTTAAGTGTACTCTTTTATTTTATAGATTTTCTTCAACACAACCGGA    100

BSNT_04092         1 -----------ATGGCCTTCTGGTTGCTTTCTATTGTCTGGACTCTGCAA     39
                                |||||||||||||||||||||||||||||||||||||||
BSU28160___he    101 AGGCTGGAAAAATGGCCTTCTGGTTGCTTTCTATTGTCTGGACTCTGCAA    150

BSNT_04092        40 ACCGTGTATTTGGCCTATTTTATGTGGGTGACGGGGCGGTTTCCGGTATT     89
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    151 ACCGTGTATTTGGCCTATTTTATGTGGGTGACGGGGCGGTTTCCGGTATT    200

BSNT_04092        90 AAATGTGACGGAGGCGCTTTATTTTTATGCCTGGGTGCTTGTCACGCTGT    139
                     |||||||||.|||||.||||||||||||||||||||||||||||||||||
BSU28160___he    201 AAATGTGACAGAGGCACTTTATTTTTATGCCTGGGTGCTTGTCACGCTGT    250

BSNT_04092       140 CACTGGTGCTGACAAAGCTTTTACGTGTTGACTTTATCGTGTTTTTTACA    189
                     ||||.||.||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    251 CACTTGTACTGACAAAGCTTTTACGTGTTGACTTTATCGTGTTTTTTACA    300

BSNT_04092       190 AATGTTATAGGATTTTCTATGATCGCCATTCACACATTTTCACCGACAGA    239
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    301 AATGTTATAGGATTTTCTATGATCGCCATTCACACATTTTCACCGACAGA    350

BSNT_04092       240 GCAGCAGTCAGCTGCTTTTTCCGGGCAGCTTGTATCCGAGCTTTTGGTGA    289
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    351 GCAGCAGTCAGCTGCTTTTTCCGGGCAGCTTGTATCCGAGCTTTTGGTGA    400

BSNT_04092       290 TTCATATTACAATGGCGATTCTTTCATACGGCGCTTTTTCCCTTTCTTTC    339
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    401 TTCATATTACAATGGCGATTCTTTCATACGGCGCTTTTTCCCTTTCTTTC    450

BSNT_04092       340 GTTTTTTCTGTGCTATATATGTTTCAATATCATCTGCTGAAAAAGAAAAA    389
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    451 GTTTTTTCTGTGCTATATATGTTTCAATATCATCTGCTGAAAAAGAAAAA    500

BSNT_04092       390 GTGGGGAAAATGGCTGTTGAGAATAGAAGATTTATCTAAGCTTGATTATA    439
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    501 GTGGGGAAAATGGCTGTTGAGAATAGAAGATTTATCTAAGCTTGATTATA    550

BSNT_04092       440 TGGCGTATGTTTTAAATGTCATTGGGGTTCCGATGCTGCTGCTGAGTTTG    489
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    551 TGGCGTATGTTTTAAATGTCATTGGGGTTCCGATGCTGCTGCTGAGTTTG    600

BSNT_04092       490 ATTCTCGGCGTCATATGGGCATATGTCTCACTAGAAACGCTGTATTGGTT    539
                     ||||||||||||||.|||||.|||||||||||||||||||||||||||||
BSU28160___he    601 ATTCTCGGCGTCATTTGGGCGTATGTCTCACTAGAAACGCTGTATTGGTT    650

BSNT_04092       540 TGACGCCAAAGTGCTTGGTTCGTTTGTCGTCCTGCTGCTGTACAGCTATT    589
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    651 TGACGCCAAAGTGCTTGGTTCGTTTGTCGTCCTGCTGCTGTACAGCTATT    700

BSNT_04092       590 ATCTTTATATCAGGCTGATTAAAGAGCTGCAAGGAAAGGTCGCTGCACTG    639
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU28160___he    701 ATCTTTATATCAGGCTGATTAAGGAGCTGCAAGGAAAGGTCGCTGCACTG    750

BSNT_04092       640 TGGAATACGGCTTGTTTTCTGGTGCTGATGATCAATTATTTCCTGCTTGG    689
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    751 TGGAATACGGCTTGTTTTCTGGTGCTGATGATCAATTATTTCCTGCTTGG    800

BSNT_04092       690 AAGCCTGTCGCAATTCCATTGGTTCAGTTAA    720
                     |||||||||||||||||||||||||||||||
BSU28160___he    801 AAGCCTGTCGCAATTCCATTGGTTCAGTTAA    831


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