Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04092 and BSU28160

See DNA alignment / Visit BSNT_04092 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence pep-align/BSNT_04092.1.22522.seq
#    -bsequence pep-align/BSU28160___hemX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04092-BSU28160___hemX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04092-BSU28160___hemX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04092
# 2: BSU28160___hemX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     239/276 (86.6%)
# Similarity:   239/276 (86.6%)
# Gaps:          37/276 (13.4%)
# Score: 1229.0
# 
#
#=======================================

BSNT_04092         1 -------------------------------------MAFWLLSIVWTLQ     13
                                                          |||||||||||||
BSU28160___he      1 MIDTAMARLNEGTIVIYALSVLFYFIDFLQHNRKAGKMAFWLLSIVWTLQ     50

BSNT_04092        14 TVYLAYFMWVTGRFPVLNVTEALYFYAWVLVTLSLVLTKLLRVDFIVFFT     63
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he     51 TVYLAYFMWVTGRFPVLNVTEALYFYAWVLVTLSLVLTKLLRVDFIVFFT    100

BSNT_04092        64 NVIGFSMIAIHTFSPTEQQSAAFSGQLVSELLVIHITMAILSYGAFSLSF    113
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    101 NVIGFSMIAIHTFSPTEQQSAAFSGQLVSELLVIHITMAILSYGAFSLSF    150

BSNT_04092       114 VFSVLYMFQYHLLKKKKWGKWLLRIEDLSKLDYMAYVLNVIGVPMLLLSL    163
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    151 VFSVLYMFQYHLLKKKKWGKWLLRIEDLSKLDYMAYVLNVIGVPMLLLSL    200

BSNT_04092       164 ILGVIWAYVSLETLYWFDAKVLGSFVVLLLYSYYLYIRLIKELQGKVAAL    213
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28160___he    201 ILGVIWAYVSLETLYWFDAKVLGSFVVLLLYSYYLYIRLIKELQGKVAAL    250

BSNT_04092       214 WNTACFLVLMINYFLLGSLSQFHWFS    239
                     ||||||||||||||||||||||||||
BSU28160___he    251 WNTACFLVLMINYFLLGSLSQFHWFS    276


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.