Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05293 and BSU34770

See Amino acid alignment / Visit BSNT_05293 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_05293___yvcJ.1.22522.seq
#    -bsequence dna-align/BSU34770___yvcJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05293___yvcJ-BSU34770___yvcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05293___yvcJ-BSU34770___yvcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05293___yvcJ
# 2: BSU34770___yvcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 888
# Identity:     881/888 (99.2%)
# Similarity:   881/888 (99.2%)
# Gaps:           0/888 ( 0.0%)
# Score: 4377.0
# 
#
#=======================================

BSNT_05293___      1 ATGAGTGTTAGTGAATCACATGATATTCAGCTTGTCATTATAACCGGAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU34770___yv      1 ATGAGTGTTAGTGAATCACATGATATTCAGCTTGTCATTATAACTGGAAT     50

BSNT_05293___     51 GTCGGGAGCGGGGAAAACTGTCGCGATTCAAAGCTTTGAAGATCTCGGCT    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU34770___yv     51 GTCGGGAGCGGGGAAAACTGTCGCGATCCAAAGCTTTGAAGATCTCGGCT    100

BSNT_05293___    101 ATTTCTGCGTCGATAATCTTCCGCCTTCATTGCTTCCGAAGTTTTTAGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    101 ATTTCTGCGTCGATAATCTTCCGCCTTCATTGCTTCCGAAGTTTTTAGAG    150

BSNT_05293___    151 CTGATGAAGGAATCAAATTCGAAAATGAGCAAAGTTGCGCTCGTGATGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    151 CTGATGAAGGAATCAAATTCGAAAATGAGCAAAGTTGCGCTCGTGATGGA    200

BSNT_05293___    201 TCTGCGTGGCCGCGAATTTTTTGACCGGCTGATTGAAGCGCTGGATGAAA    250
                     |.||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    201 TTTGCGCGGCCGCGAATTTTTTGACCGGCTGATTGAAGCGCTGGATGAAA    250

BSNT_05293___    251 TGGCCGAAAATCCGTGGATCACACCGCGAATTTTATTCCTGGACGCGAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    251 TGGCCGAAAATCCGTGGATCACACCGCGAATTTTATTCCTGGACGCGAAG    300

BSNT_05293___    301 GATTCCATTCTCGTCACAAGATATAAAGAAACGAGACGCTCGCATCCGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    301 GATTCCATTCTCGTCACAAGATATAAAGAAACGAGACGCTCGCATCCGCT    350

BSNT_05293___    351 GGCAGCGACTGGCCTGCCGCTTGAAGGCATCGCGCTGGAACGAGAGCTGC    400
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU34770___yv    351 GGCAGCGACTGGCCTGCCGCTTGAAGGCATCGCGCTAGAACGAGAGCTGC    400

BSNT_05293___    401 TTGAGGAATTAAAAGGCCGCTCTCAAATCATTTACGATACGTCTGACATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    401 TTGAGGAATTAAAAGGCCGCTCTCAAATCATTTACGATACGTCTGACATG    450

BSNT_05293___    451 AAGCCGCGTGATTTGCGTGAAAAAATCGTGAAGCACTTTGCGACAAACCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    451 AAGCCGCGTGATTTGCGTGAAAAAATCGTGAAGCACTTTGCGACAAACCA    500

BSNT_05293___    501 AGGAGAGACATTTACCGTAAATGTGATGTCATTTGGTTTTAAATACGGTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    501 AGGAGAGACATTTACCGTAAATGTGATGTCATTTGGTTTTAAATACGGTA    550

BSNT_05293___    551 TTCCAATTGATGCAGATCTCGTCTTTGATGTCAGATTTTTGCCGAATCCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    551 TTCCAATTGATGCAGATCTCGTCTTTGATGTCAGATTTTTGCCGAATCCG    600

BSNT_05293___    601 TACTATATCGAAAGCATGCGGCCGCTGACTGGCAAGGATAAAGAGGTTTC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    601 TACTATATCGAAAGCATGCGGCCGCTGACTGGCAAGGATAAAGAGGTTTC    650

BSNT_05293___    651 CTCTTACGTCATGAAGTGGAATGAAACACAAAAGTTCAATGAGAAATTAA    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU34770___yv    651 CTCTTACGTCATGAAGTGGAATGAAACGCAAAAGTTCAATGAGAAATTAA    700

BSNT_05293___    701 TTGATCTGCTGAGCTTTATGCTTCCATCTTATAAAAGAGAAGGAAAAAGC    750
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU34770___yv    701 TTGATCTGCTGAGCTTTATGCTTCCATCTTACAAAAGAGAAGGAAAAAGC    750

BSNT_05293___    751 CAGGTTGTCATTGCGATCGGCTGCACAGGGGGCCAGCACCGCTCTGTGAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    751 CAGGTTGTCATTGCGATCGGCTGCACAGGGGGCCAGCACCGCTCTGTGAC    800

BSNT_05293___    801 ATTAGCCGAGAATTTAGCTGATTATTTCAAAAAGGATTACTATACTCATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    801 ATTAGCCGAGAATTTAGCTGATTATTTCAAAAAGGATTACTATACTCATG    850

BSNT_05293___    851 TTACTCACCGGGACATTGAAAAGAGAAGCCGGAAATAA    888
                     ||||||||||||||||||||||||||||||||||||||
BSU34770___yv    851 TTACTCACCGGGACATTGAAAAGAGAAGCCGGAAATAA    888


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05293 and BSU34770

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
