Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05293 and BSU34770

See DNA alignment / Visit BSNT_05293 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_05293___yvcJ.1.22522.seq
#    -bsequence pep-align/BSU34770___yvcJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05293___yvcJ-BSU34770___yvcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05293___yvcJ-BSU34770___yvcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05293___yvcJ
# 2: BSU34770___yvcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     295/295 (100.0%)
# Similarity:   295/295 (100.0%)
# Gaps:           0/295 ( 0.0%)
# Score: 1516.0
# 
#
#=======================================

BSNT_05293___      1 MSVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv      1 MSVSESHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLE     50

BSNT_05293___     51 LMKESNSKMSKVALVMDLRGREFFDRLIEALDEMAENPWITPRILFLDAK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv     51 LMKESNSKMSKVALVMDLRGREFFDRLIEALDEMAENPWITPRILFLDAK    100

BSNT_05293___    101 DSILVTRYKETRRSHPLAATGLPLEGIALERELLEELKGRSQIIYDTSDM    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    101 DSILVTRYKETRRSHPLAATGLPLEGIALERELLEELKGRSQIIYDTSDM    150

BSNT_05293___    151 KPRDLREKIVKHFATNQGETFTVNVMSFGFKYGIPIDADLVFDVRFLPNP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    151 KPRDLREKIVKHFATNQGETFTVNVMSFGFKYGIPIDADLVFDVRFLPNP    200

BSNT_05293___    201 YYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFMLPSYKREGKS    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    201 YYIESMRPLTGKDKEVSSYVMKWNETQKFNEKLIDLLSFMLPSYKREGKS    250

BSNT_05293___    251 QVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK    295
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU34770___yv    251 QVVIAIGCTGGQHRSVTLAENLADYFKKDYYTHVTHRDIEKRSRK    295


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.