Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05518 and BSU36170

See Amino acid alignment / Visit BSNT_05518 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:28
# Commandline: needle
#    -asequence dna-align/BSNT_05518.1.22522.seq
#    -bsequence dna-align/BSU36170___ywqL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05518-BSU36170___ywqL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05518-BSU36170___ywqL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05518
# 2: BSU36170___ywqL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 811
# Identity:     525/811 (64.7%)
# Similarity:   525/811 (64.7%)
# Gaps:         269/811 (33.2%)
# Score: 2547.0
# 
#
#=======================================

BSNT_05518         0 --------------------------------------------------      0
                                                                       
BSU36170___yw      1 ATGAAGGTATTTGATGTGCATAAATTTGATATGAAAAAGGAACAAGACTT     50

BSNT_05518         0 --------------------------------------------------      0
                                                                       
BSU36170___yw     51 TTTACAAGTGCAATTTAACCTTAAAAATCGTATCAACCTATCCCCCACGA    100

BSNT_05518         0 --------------------------------------------------      0
                                                                       
BSU36170___yw    101 TCCATCCAGACTCCATCAACACCTGCGCAGGCGTCGACCTGGCCTATTGG    150

BSNT_05518         1 ------------------------GTGTGCAGTATTATCGTGATTGACGC     26
                                             ||||||.||||||||||.||||||||
BSU36170___yw    151 GAGCAGGATGGAGAACCATACGGAGTGTGCTGTATTATCGTAATTGACGC    200

BSNT_05518        27 TGATACAAAAGAAGTCATTGAAAAAGTGCACAGCATGGGGAAAATCAGCG     76
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU36170___yw    201 TGATACAAAAGAAGTCATTGAAAAAGTGCACAGCATGGGGAGAATCAGCG    250

BSNT_05518        77 TGCCGTATGTTTCCGGTTTTCTTGCGTTTCGTGAGCTGCCTTTGATCATC    126
                     |||||||||||||||||||||||||||||||.||||||||.|||||||||
BSU36170___yw    251 TGCCGTATGTTTCCGGTTTTCTTGCGTTTCGCGAGCTGCCCTTGATCATC    300

BSNT_05518       127 GAGGCGGCGAAAAAGCTGGAGACGGAGCCGGATGTCTTCTTGTTTGATGG    176
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36170___yw    301 GAGGCGGCGAAAAAGCTGGAGACGGAGCCGGATGTCTTCTTGTTTGATGG    350

BSNT_05518       177 CAACGGATATTTGCATTACAACCATATGGGCGTTGCCACCCATGCGGCTT    226
                     ||||||||||.||||||||||.||||||||||||||||||||||||||||
BSU36170___yw    351 CAACGGATATCTGCATTACAATCATATGGGCGTTGCCACCCATGCGGCTT    400

BSNT_05518       227 TTTTTCTGGGCAAGCCGACGATTGGGATTGCGAAAACCTATCTCAAAATC    276
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU36170___yw    401 TTTTTCTGGGCAAGCCGACGATTGGGATAGCGAAAACCTATCTCAAAATC    450

BSNT_05518       277 AAAGGCTATGATTTCGTGATGCCTGAAAATGAAGTCGGTGCATACACCGA    326
                     |||||||..||||||||||.||||||||.||||||.||.|||||||||||
BSU36170___yw    451 AAAGGCTGCGATTTCGTGACGCCTGAAATTGAAGTAGGCGCATACACCGA    500

BSNT_05518       327 TATTCTCATTGACGGCGAGGTATATGGCCGGGCGCTGCGAACGCGGCGGG    376
                     ||||.||||||||||||||||||||||.||||||||||||||||||||||
BSU36170___yw    501 TATTATCATTGACGGCGAGGTATATGGACGGGCGCTGCGAACGCGGCGGG    550

BSNT_05518       377 ACGTGAAGCCTATTTTCTTGTCTTGCGGTAATTATATTGATTTAGACAGC    426
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36170___yw    551 ACGTGAAGCCTATTTTCTTGTCTTGCGGTAATTATATTGATTTAGACAGC    600

BSNT_05518       427 AGCTATCAGATCACGATGAGCTTGATCAATCAAGAAAGCAGGCTGCCGAT    476
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36170___yw    601 AGCTATCAGATCACGATGAGCTTGATCAATCAAGAAAGCAGGCTGCCGAT    650

BSNT_05518       477 CCCTGTCCGCCTGGCTGACGTTGAGACGCATGTTTTGCGAACGTTTTA-C    525
                     |||||||||||||||||||.|||||||||||||||||||||||||||| |
BSU36170___yw    651 CCCTGTCCGCCTGGCTGACCTTGAGACGCATGTTTTGCGAACGTTTTATC    700

BSNT_05518       526 AGAAAAATCACGTGTAACACTTGGGGCTCTAAGTCATCAAGTGTTTTTTT    575
                     |||||||||||||||||                                 
BSU36170___yw    701 AGAAAAATCACGTGTAA---------------------------------    717

BSNT_05518       576 GTATGTGTGTGCTTTCATGGTCTCAAAAACCTTGTCGTCCTTGTGGAGAG    625
                                                                       
BSU36170___yw    717 --------------------------------------------------    717

BSNT_05518       626 GTTTTATTTGA    636
                                
BSU36170___yw    717 -----------    717


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