Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05518 and BSU36170

See DNA alignment / Visit BSNT_05518 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:28
# Commandline: needle
#    -asequence pep-align/BSNT_05518.1.22522.seq
#    -bsequence pep-align/BSU36170___ywqL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05518-BSU36170___ywqL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05518-BSU36170___ywqL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05518
# 2: BSU36170___ywqL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     168/269 (62.5%)
# Similarity:   173/269 (64.3%)
# Gaps:          89/269 (33.1%)
# Score: 863.0
# 
#
#=======================================

BSNT_05518         0 --------------------------------------------------      0
                                                                       
BSU36170___yw      1 MKVFDVHKFDMKKEQDFLQVQFNLKNRINLSPTIHPDSINTCAGVDLAYW     50

BSNT_05518         1 --------MCSIIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLII     42
                             :|.|||||||||||||||||||:|||||||||||||||||||
BSU36170___yw     51 EQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLII    100

BSNT_05518        43 EAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKI     92
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36170___yw    101 EAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKI    150

BSNT_05518        93 KGYDFVMPENEVGAYTDILIDGEVYGRALRTRRDVKPIFLSCGNYIDLDS    142
                     ||.|||.||.||||||||:|||||||||||||||||||||||||||||||
BSU36170___yw    151 KGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKPIFLSCGNYIDLDS    200

BSNT_05518       143 SYQITMSLINQESRLPIPVRLADVETHVLRTFYRKITCNTWGSKSSSVFL    192
                     |||||||||||||||||||||||:|||||||||:|...            
BSU36170___yw    201 SYQITMSLINQESRLPIPVRLADLETHVLRTFYQKNHV------------    238

BSNT_05518       193 YVCAFMVSKTLSSLWRGFI    211
                                        
BSU36170___yw    238 -------------------    238


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