Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05812 and BSU37960

See Amino acid alignment / Visit BSNT_05812 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence dna-align/BSNT_05812___ywdH.1.22522.seq
#    -bsequence dna-align/BSU37960___ywdH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05812___ywdH-BSU37960___ywdH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05812___ywdH-BSU37960___ywdH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05812___ywdH
# 2: BSU37960___ywdH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1371
# Identity:    1354/1371 (98.8%)
# Similarity:  1354/1371 (98.8%)
# Gaps:           0/1371 ( 0.0%)
# Score: 6702.0
# 
#
#=======================================

BSNT_05812___      1 ATGAACAGCATCCCCTCTATCATCAGCAAGCATAAAGCCTATTTTGCGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw      1 ATGAACAGCATCCCCTCTATCATCAGCAAGCATAAAGCCTATTTTGCGGC     50

BSNT_05812___     51 GGGACATACGAGACCGCTTGAATCGAGACTGAACATTTTGCGAAAGCTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw     51 GGGACATACGAGACCGCTTGAATCGAGACTGAACATTTTGCGAAAGCTGA    100

BSNT_05812___    101 AACAAGCCGTCAGAACTCATGAAGCCGATCTCATAGCCGCTCTCTACCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    101 AACAAGCCGTCAGAACTCATGAAGCCGATCTCATAGCCGCTCTCTACCAG    150

BSNT_05812___    151 GATCTCCACAAATCCGAGCAAGAAGCATACTCAACAGAAATCGGAATCGT    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    151 GATCTCCATAAATCCGAGCAAGAAGCATACTCAACAGAAATCGGAATCGT    200

BSNT_05812___    201 CTTGGAGGAAATCAGCTTTGTCATGAAACGGCTGAGAAAATGGTCCAAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    201 CTTGGAGGAAATCAGCTTTGTCATGAAACGGCTGAGAAAATGGTCCAAGC    250

BSNT_05812___    251 CGAAACGAGTCAAAACGCCGCTGACTCATCTAGGCTCCAAAAGCATCATC    300
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU37960___yw    251 CGAAACGAGTCAAAACGCCGTTGACTCATCTAGGCTCCAAAAGCATCATC    300

BSNT_05812___    301 ATTCCTGAGCCGTATGGAACCGTTTTGGTGATTGCACCTTGGAACTATCC    350
                     ||.||||||||||||||||||||||||||||||||.||||||||||||||
BSU37960___yw    301 ATCCCTGAGCCGTATGGAACCGTTTTGGTGATTGCGCCTTGGAACTATCC    350

BSNT_05812___    351 CTTGCAGCTGGCGCTTTCTCCGTTGATTGGAGCCATTGCGGCGGGGAACA    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU37960___yw    351 CTTGCAGCTGGCGCTTTCTCCGTTGATTGGCGCCATTGCGGCGGGGAACA    400

BSNT_05812___    401 CGGTCGTTCTCAAGCCATCAGAATATACGCCGGCTGTTTCTGCTATTCTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    401 CGGTCGTTCTCAAGCCATCAGAATATACGCCGGCTGTTTCTGCTATTCTT    450

BSNT_05812___    451 TCCAAACTCATCAGCAGCGTTTTTCCTACTGATTATGTCGCTATGGCAGA    500
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU37960___yw    451 TCCAAACTCATCAGCAGCGTTTTTCCAACTGATTATGTCGCTATGGCAGA    500

BSNT_05812___    501 AGGCGGGCCCGATGTCAGCACAGCATTATTACAGCAGCCCTTTGACTACA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    501 AGGCGGGCCCGATGTCAGCACAGCATTATTACAGCAGCCCTTTGACTACA    550

BSNT_05812___    551 TTTTCTTTACAGGCAGTGTAGCTGTAGGAAAAATCGTCATGGAGGCCGCC    600
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU37960___yw    551 TTTTCTTTACCGGCAGTGTAGCTGTAGGAAAAATCGTCATGGAGGCCGCC    600

BSNT_05812___    601 GCCAAACAATTAATTCCCGTAACCTTGGAGCTCGGCGGCAAAAGCCCCTG    650
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU37960___yw    601 GCCAAACAATTAATTCCCGTAACCTTGGAGCTCGGCGGCAAAAGTCCCTG    650

BSNT_05812___    651 CATCGTCCATAAAGATGCTGACATTCAGCTTGCCGCCAAACGCATCGTCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    651 CATCGTCCATAAAGATGCTGACATTCAGCTTGCCGCCAAACGCATCGTCT    700

BSNT_05812___    701 TCGGGAAATTTACAAATGCGGGACAAACCTGCATCGCACCGGATTATTTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    701 TCGGGAAATTTACAAATGCGGGACAAACCTGCATCGCACCGGATTATTTA    750

BSNT_05812___    751 TTTGTCCACGAGGACATCAAAACGAAGCTGGCAGAAGAAATGAAGCGTGC    800
                     |||||||||||||||||||||||||||||..|||||||||||||||||||
BSU37960___yw    751 TTTGTCCACGAGGACATCAAAACGAAGCTCACAGAAGAAATGAAGCGTGC    800

BSNT_05812___    801 GATCAGAGAATTTTACGGCCCTCAGCCGGAACGGAATCCACAGTACGGCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    801 GATCAGAGAATTTTACGGCCCTCAGCCGGAACGGAATCCACAGTACGGCA    850

BSNT_05812___    851 AAATCGTCAGTGAGCGCCACTATCAGCGGCTGCTCAGCTTTCTGAATGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    851 AAATCGTCAGTGAGCGCCACTATCAGCGGCTGCTCAGCTTTCTGAATGAT    900

BSNT_05812___    901 GGCATCCCGCTCACAGGCGGACAATCTGATCCTGATCACCACAAAATTGC    950
                     ||||||||||||||||||||||||||||||||..||||.|||||||||||
BSU37960___yw    901 GGCATCCCGCTCACAGGCGGACAATCTGATCCCAATCATCACAAAATTGC    950

BSNT_05812___    951 GCCGACCATTCTCGAACAAGTGAGAGATGACTCTCCAGTGATGCAGGAGG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    951 GCCGACCATTCTCGAACAAGTGAGAGATGACTCTCCAGTGATGCAGGAGG   1000

BSNT_05812___   1001 AAATTTTCGGGCCGATTCTTCCGCTCTTTACATACCGCGATATCGGGGAA   1050
                     |.||||||||||||||||||||||||||||||||||||.|||||||||||
BSU37960___yw   1001 AGATTTTCGGGCCGATTCTTCCGCTCTTTACATACCGCAATATCGGGGAA   1050

BSNT_05812___   1051 GTCATTGAAAAAGTCCAATCGCGCCCTAAGCCGCTCGCCCTGTATCTCTT   1100
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU37960___yw   1051 GTCATTGAGAAAGTCCAATCGCGCCCTAAGCCGCTCGCCCTGTATCTCTT   1100

BSNT_05812___   1101 CACCACAAACAAAGAAACTGAGCGCGCTGTTTTAGGAAATCTGTCGTTTG   1150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU37960___yw   1101 CACCACAAACAAAGAAATTGAGCGCGCTGTTTTAGGAAATCTGTCGTTTG   1150

BSNT_05812___   1151 GCGGGGGCTGTGTCAATGATACGTTAATGCATGTTGCGACGCCGTATTTG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw   1151 GCGGGGGCTGTGTCAATGATACGTTAATGCATGTTGCGACGCCGTATTTG   1200

BSNT_05812___   1201 CCATTCGGCGGCGTCGGGGAAAGCGGCATCGGCAGCTATCACGGGTTTGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw   1201 CCATTCGGCGGCGTCGGGGAAAGCGGCATCGGCAGCTATCACGGGTTTGA   1250

BSNT_05812___   1251 CAGTTTTAACACATTCACGCACAAAAAAAGCGTCGTCAAACAAACGAACC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw   1251 CAGTTTTAACACATTCACGCACAAAAAAAGCGTCGTCAAACAAACGAACC   1300

BSNT_05812___   1301 GTTTCGACTTCGCATTTCGTTATCCTTCCTCCAAAAACGGGCTGCGAATG   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw   1301 GTTTCGACTTCGCATTTCGTTATCCTTCCTCCAAAAACGGGCTGCGAATG   1350

BSNT_05812___   1351 ATTCGAAAAATACTCAAATAA   1371
                     |||||||||||||||||||||
BSU37960___yw   1351 ATTCGAAAAATACTCAAATAA   1371


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