Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05812 and BSU37960

See DNA alignment / Visit BSNT_05812 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:01
# Commandline: needle
#    -asequence pep-align/BSNT_05812___ywdH.1.22522.seq
#    -bsequence pep-align/BSU37960___ywdH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05812___ywdH-BSU37960___ywdH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05812___ywdH-BSU37960___ywdH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05812___ywdH
# 2: BSU37960___ywdH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     452/456 (99.1%)
# Similarity:   454/456 (99.6%)
# Gaps:           0/456 ( 0.0%)
# Score: 2330.0
# 
#
#=======================================

BSNT_05812___      1 MNSIPSIISKHKAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIAALYQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw      1 MNSIPSIISKHKAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIAALYQ     50

BSNT_05812___     51 DLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGSKSII    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw     51 DLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGSKSII    100

BSNT_05812___    101 IPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAIL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    101 IPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAIL    150

BSNT_05812___    151 SKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIVMEAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    151 SKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIVMEAA    200

BSNT_05812___    201 AKQLIPVTLELGGKSPCIVHKDADIQLAAKRIVFGKFTNAGQTCIAPDYL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    201 AKQLIPVTLELGGKSPCIVHKDADIQLAAKRIVFGKFTNAGQTCIAPDYL    250

BSNT_05812___    251 FVHEDIKTKLAEEMKRAIREFYGPQPERNPQYGKIVSERHYQRLLSFLND    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU37960___yw    251 FVHEDIKTKLTEEMKRAIREFYGPQPERNPQYGKIVSERHYQRLLSFLND    300

BSNT_05812___    301 GIPLTGGQSDPDHHKIAPTILEQVRDDSPVMQEEIFGPILPLFTYRDIGE    350
                     |||||||||||:||||||||||||||||||||||||||||||||||:|||
BSU37960___yw    301 GIPLTGGQSDPNHHKIAPTILEQVRDDSPVMQEEIFGPILPLFTYRNIGE    350

BSNT_05812___    351 VIEKVQSRPKPLALYLFTTNKETERAVLGNLSFGGGCVNDTLMHVATPYL    400
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU37960___yw    351 VIEKVQSRPKPLALYLFTTNKEIERAVLGNLSFGGGCVNDTLMHVATPYL    400

BSNT_05812___    401 PFGGVGESGIGSYHGFDSFNTFTHKKSVVKQTNRFDFAFRYPSSKNGLRM    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37960___yw    401 PFGGVGESGIGSYHGFDSFNTFTHKKSVVKQTNRFDFAFRYPSSKNGLRM    450

BSNT_05812___    451 IRKILK    456
                     ||||||
BSU37960___yw    451 IRKILK    456


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