Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05904 and BSU38590

See Amino acid alignment / Visit BSNT_05904 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence dna-align/BSNT_05904.1.22522.seq
#    -bsequence dna-align/BSU38590___licB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05904-BSU38590___licB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05904-BSU38590___licB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05904
# 2: BSU38590___licB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     249/309 (80.6%)
# Similarity:   249/309 (80.6%)
# Gaps:          57/309 (18.4%)
# Score: 1233.0
# 
#
#=======================================

BSNT_05904         0 --------------------------------------------------      0
                                                                       
BSU38590___li      1 ATGAATATATTACTCGTTTGTGCAGCAGGCATGTCTACTAGCTTACTGGT     50

BSNT_05904         1 -------ATGGAAAAAAGTGCGCAGGAACAGGGAAAAGACTATACCATTT     43
                            |||||||||||||||||||||||||||||||||||||||||||
BSU38590___li     51 GAGCAAGATGGAAAAAAGTGCGCAGGAACAGGGAAAAGACTATACCATTT    100

BSNT_05904        44 GGGCAGTTTCAGGCGATTCTGTACAAAATCATATCGATAAAGCGGATGTA     93
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38590___li    101 GGGCAGTTTCAGGCGATTCTGTACAAAATCATATCGATAAAGCGGATGTA    150

BSNT_05904        94 TTGCTTCTCGGTCCGCAAGTCCGTTACATGCTTCCGCAGCTCAAAAAATT    143
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38590___li    151 TTGCTTCTCGGTCCGCAAGTCCGTTACATGCTTCCGCAGCTCAAAAAATT    200

BSNT_05904       144 AGGAGAGTCAAAGGGGGTTCCGGTAGATGTCATTAATACCGTCCATTATG    193
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38590___li    201 AGGAGAGTCAAAGGGGGTTCCGGTAGACGTCATTAATACCGTCCATTATG    250

BSNT_05904       194 GCACGTGCAACGGGGCGGAAGTGCTGAAATCAGCTGAACAGCTTGGACAT    243
                     |.||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38590___li    251 GAACGTGCAATGGGGCGGAAGTGCTGAAATCAGCTGAACAGCTTGGACAT    300

BSNT_05904       244 GTGTCATAG    252
                     |||||||||
BSU38590___li    301 GTGTCATAG    309


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