Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05904 and BSU38590

See DNA alignment / Visit BSNT_05904 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence pep-align/BSNT_05904.1.22522.seq
#    -bsequence pep-align/BSU38590___licB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05904-BSU38590___licB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05904-BSU38590___licB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05904
# 2: BSU38590___licB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      83/102 (81.4%)
# Similarity:    83/102 (81.4%)
# Gaps:          19/102 (18.6%)
# Score: 430.0
# 
#
#=======================================

BSNT_05904         1 -------------------MEKSAQEQGKDYTIWAVSGDSVQNHIDKADV     31
                                        |||||||||||||||||||||||||||||||
BSU38590___li      1 MNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWAVSGDSVQNHIDKADV     50

BSNT_05904        32 LLLGPQVRYMLPQLKKLGESKGVPVDVINTVHYGTCNGAEVLKSAEQLGH     81
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38590___li     51 LLLGPQVRYMLPQLKKLGESKGVPVDVINTVHYGTCNGAEVLKSAEQLGH    100

BSNT_05904        82 VS     83
                     ||
BSU38590___li    101 VS    102


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