Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06258 and BSU40830

See Amino acid alignment / Visit BSNT_06258 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence dna-align/BSNT_06258___yyaK.1.22522.seq
#    -bsequence dna-align/BSU40830___yyaK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06258___yyaK-BSU40830___yyaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06258___yyaK-BSU40830___yyaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06258___yyaK
# 2: BSU40830___yyaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 924
# Identity:     882/924 (95.5%)
# Similarity:   882/924 (95.5%)
# Gaps:          24/924 ( 2.6%)
# Score: 4338.0
# 
#
#=======================================

BSNT_06258___      1 TTGAAAGGAAGAGACATAGAAGGAATGAATTCATTTATCCGTCCTATAGA     50
                                             ||||||||||||||||||||||||||
BSU40830___yy      1 ------------------------ATGAATTCATTTATCCGTCCTATAGA     26

BSNT_06258___     51 AGGAAACAATACGTTGTGGAGATATTTTTTCGCTTTTTTGGTGATGGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy     27 AGGAAACAATACGTTGTGGAGATATTTTTTCGCTTTTTTGGTGATGGTAG     76

BSNT_06258___    101 GGTTATATGTATTCGGGAATATAGCTTACCTTTTCGCTATACTGTTCACG    150
                     |||||||||||||.|||||||||||||||||||||||||||.||||||||
BSU40830___yy     77 GGTTATATGTATTAGGGAATATAGCTTACCTTTTCGCTATATTGTTCACG    126

BSNT_06258___    151 GTTATTGTGAATCCCAATATCACGTTTGATTTGGATGAAGCTGTGCTGAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    127 GTTATTGTGAATCCCAATATCACGTTTGATTTGGATGAAGCTGTGCTGAG    176

BSNT_06258___    201 TGATCCTCTCGTAGATCTTTATTTGTCCCATGTGATTTATTTATTCGCCA    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    177 TGATCCCCTCGTAGATCTTTATTTGTCCCATGTGATTTATTTATTCGCCA    226

BSNT_06258___    251 TTCCGGGAGTTTGGCTGGCTGTGCGCTTTATTTTGAAGCGGCCTTTCCGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    227 TTCCGGGAGTTTGGCTGGCTGTGCGCTTTATTTTGAAGCGGCCTTTCCGA    276

BSNT_06258___    301 ACTGTGATTACACCAAATTCAAAGATGAATTGGCGGAGAATTTCCTTTGG    350
                     ||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    277 ACGGTGATAACACCAAATTCAAAGATGAATTGGCGGAGAATTTCCTTTGG    326

BSNT_06258___    351 TTTTATTGCTTATTTCTTGCTGATGATCGCCGTACAATTGATTGATTTTG    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU40830___yy    327 TTTTATTGCTTATTTCTTGCTAATGATCGCCGTACAATTGATTGATTTTG    376

BSNT_06258___    401 CGATTCATCCTGATAGCTATTCAATGCAGGAGTTTAATGCCTCACGCTTT    450
                     .|||||||||||||||||||||||||||.|||||||||||.|||||.|||
BSU40830___yy    377 TGATTCATCCTGATAGCTATTCAATGCAAGAGTTTAATGCATCACGATTT    426

BSNT_06258___    451 ATCTGGCTGCTAGCGGCTGCCCTCATTTTGGTTCCGATTCAGACATCAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    427 ATCTGGCTGCTAGCGGCTGCCCTCATTTTGGTTCCGATTCAGACATCAGC    476

BSNT_06258___    501 TGAGGAACTGTTTTTCAGGGGATTTTTGCTTCAAGCTTTCGGGAGATTGA    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    477 TGAGGAACTATTTTTCAGGGGATTTTTGCTTCAAGCTTTCGGGAGATTGA    526

BSNT_06258___    551 CGAAAAATCCTCTATTTTTGACACTGATTGTCGGAGGATTGTTTGGCGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    527 CGAAAAATCCTCTATTTTTGACACTGATTGTCGGAGGATTGTTTGGCGTA    576

BSNT_06258___    601 TTGCATTTTGCGAATCCAGAAATGAACAATGGCGCTGTCTGGGCAGGAAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    577 TTGCATTTTGCGAATCCAGAAATGAACAATGGCGCTGTCTGGGCAGGAAT    626

BSNT_06258___    651 TGAGTATTTAACATTTGGTTTTGTGTGGACCTATTACACGATTAAAACTG    700
                     ||||||.|||||||||||.|||||||||||.|||||||||||||||||||
BSU40830___yy    627 TGAGTACTTAACATTTGGGTTTGTGTGGACGTATTACACGATTAAAACTG    676

BSNT_06258___    701 GAAGCATCGAAATATCACTTGGCGCCCATGCCGCGAATAATATGTTTTTG    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    677 GGAGCATCGAAATATCACTTGGCGCCCATGCCGCGAATAATATGTTTTTG    726

BSNT_06258___    751 TGTATGTTTATTACAGAAAAAAACAGTGTGTATGGAGGAATTCCTTCTCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    727 TGTATGTTTATTACAGAAAAAAACAGTGTGTATGGAGGAATTCCTTCTCT    776

BSNT_06258___    801 CTTTACGGTTACGCGGGGGAACCCGATGTGGGAGGCTTTCTTTACGATAG    850
                     .|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    777 GTTTACCGTTACGCGGGGGAACCCGATGTGGGAGGCTTTCTTTACGATAG    826

BSNT_06258___    851 CGGTCAATCTTGTGTTTGCGGGGATCGCTTTATGGTACCATAAGAAATCA    900
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    827 CGGTCAACCTTGTGTTTGCGGGGATCGCTTTATGGTACCATAAGAAATCA    876

BSNT_06258___    901 AAAAGTAAGCAGCAAGGGTCTTAA    924
                     ||||||||||||||||||||||||
BSU40830___yy    877 AAAAGTAAGCAGCAAGGGTCTTAA    900


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