Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06258 and BSU40830

See DNA alignment / Visit BSNT_06258 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence pep-align/BSNT_06258___yyaK.1.22522.seq
#    -bsequence pep-align/BSU40830___yyaK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06258___yyaK-BSU40830___yyaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06258___yyaK-BSU40830___yyaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06258___yyaK
# 2: BSU40830___yyaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     297/307 (96.7%)
# Similarity:   297/307 (96.7%)
# Gaps:           8/307 ( 2.6%)
# Score: 1552.0
# 
#
#=======================================

BSNT_06258___      1 MKGRDIEGMNSFIRPIEGNNTLWRYFFAFLVMVGLYVFGNIAYLFAILFT     50
                             |||||||||||||||||||||||||||||.||||||||||||
BSU40830___yy      1 --------MNSFIRPIEGNNTLWRYFFAFLVMVGLYVLGNIAYLFAILFT     42

BSNT_06258___     51 VIVNPNITFDLDEAVLSDPLVDLYLSHVIYLFAIPGVWLAVRFILKRPFR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy     43 VIVNPNITFDLDEAVLSDPLVDLYLSHVIYLFAIPGVWLAVRFILKRPFR     92

BSNT_06258___    101 TVITPNSKMNWRRISFGFIAYFLLMIAVQLIDFAIHPDSYSMQEFNASRF    150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU40830___yy     93 TVITPNSKMNWRRISFGFIAYFLLMIAVQLIDFVIHPDSYSMQEFNASRF    142

BSNT_06258___    151 IWLLAAALILVPIQTSAEELFFRGFLLQAFGRLTKNPLFLTLIVGGLFGV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    143 IWLLAAALILVPIQTSAEELFFRGFLLQAFGRLTKNPLFLTLIVGGLFGV    192

BSNT_06258___    201 LHFANPEMNNGAVWAGIEYLTFGFVWTYYTIKTGSIEISLGAHAANNMFL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    193 LHFANPEMNNGAVWAGIEYLTFGFVWTYYTIKTGSIEISLGAHAANNMFL    242

BSNT_06258___    251 CMFITEKNSVYGGIPSLFTVTRGNPMWEAFFTIAVNLVFAGIALWYHKKS    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy    243 CMFITEKNSVYGGIPSLFTVTRGNPMWEAFFTIAVNLVFAGIALWYHKKS    292

BSNT_06258___    301 KSKQQGS    307
                     |||||||
BSU40830___yy    293 KSKQQGS    299


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