Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00118 and RBAM_000770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00118.1.9828.seq
# -bsequence dna-align/RBAM_000770___yabT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00118-RBAM_000770___yabT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00118-RBAM_000770___yabT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00118
# 2: RBAM_000770___yabT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1041
# Identity: 660/1041 (63.4%)
# Similarity: 660/1041 (63.4%)
# Gaps: 186/1041 (17.9%)
# Score: 2318.0
#
#
#=======================================
BSNT_00118 0 -------------------------------------------------- 0
RBAM_000770__ 1 ATGATGAACGACGCTTTAACGAGTTTGGCATGTAGTCTGGCACCGGGGAC 50
BSNT_00118 0 -------------------------------------------------- 0
RBAM_000770__ 51 GGCAATTCAGGGCAAATGGAACGGCAAATCCTACAGATTGCTCAAACAGC 100
BSNT_00118 1 -----------------------GTGTATTTGGCAGAAGCATCAGATGGA 27
||.|||.|||||||||||||||..|||
RBAM_000770__ 101 TTGGAAAAGGGGCTAACGGTATTGTATATCTGGCAGAAGCATCAGGCGGA 150
BSNT_00118 28 CATGTTGCCTTAAAGGTGAGTGATGACAGCCTGTCTATTACTTCTGAAGT 77
||.||.||.||.||..|.||....||||||.|||||.||||.||||||||
RBAM_000770__ 151 CAGGTCGCTTTGAAAATAAGCAGCGACAGCATGTCTGTTACCTCTGAAGT 200
BSNT_00118 78 GAATGTCTTGAAATCTTTCTCAAAGGCCCAGTCCGTTACGATGGGGCCTT 127
|||||||||.|||||.||.||||||||||.|||....|||||||||||||
RBAM_000770__ 201 GAATGTCTTAAAATCCTTTTCAAAGGCCCGGTCGCAAACGATGGGGCCTT 250
BSNT_00118 128 CTTTTTTTGATACGGATGATACTTATATTCCCGGTACC--AATACGAAAG 175
|||||||||||.||||.||..|.|.|||||| |.|.| ||||..||.|
RBAM_000770__ 251 CTTTTTTTGATGCGGACGACGCGTTTATTCC--GCAGCTGAATAAAAATG 298
BSNT_00118 176 TTTCATTTTATGCAATGGAATACATAAAAGGGCCGCTGCTTTTGAAGTAT 225
|.||.|||||.|..|||||.||||||.||||||||||.|||..|.|.|||
RBAM_000770__ 299 TCTCTTTTTACGTGATGGAGTACATAGAAGGGCCGCTTCTTCCGCAATAT 348
BSNT_00118 226 GTCAGTGATAAAGGAGGAGAGTGGATACCTGTATTAATGATTCAGCTGTT 275
.||||...|||.||||..||||||||.||.||..|.|||.|.|||||..|
RBAM_000770__ 349 ATCAGCAGTAAGGGAGCGGAGTGGATTCCGGTGCTGATGGTGCAGCTTCT 398
BSNT_00118 276 ATCCAGCTTATCGGTGCTTCACCAGCAAGGATGGATATTCGGCGATCTTA 325
.||||||.|.||.||.|||||.||||||||.|||.|.||.|||||.||.|
RBAM_000770__ 399 TTCCAGCCTGTCAGTCCTTCATCAGCAAGGGTGGGTTTTTGGCGACCTCA 448
BSNT_00118 326 AACCTGACAATCTGATCGTAACTGGTCCGCCCGCAAGGATCCGCTGCATT 375
||||.||||||||.||.|||||.||.||.||.||....||.|||||||||
RBAM_000770__ 449 AACCGGACAATCTCATTGTAACCGGACCACCGGCTGCCATTCGCTGCATT 498
BSNT_00118 376 GATGTGGGCGGCACGACAAAGGAAGGCCGGGCGATAAAAGAGTATACGGA 425
|||||.||.||.||||||||..|.|||||.|||||.||||||||||||||
RBAM_000770__ 499 GATGTAGGGGGAACGACAAAACAGGGCCGCGCGATTAAAGAGTATACGGA 548
BSNT_00118 426 GTTTTATGACAGAGGCTATTGGGGGTATGGAACAAGAAAGGCAGAGCCAT 475
||||||.|||||.||||||||||||||||||||||||||.|||||.||||
RBAM_000770__ 549 GTTTTACGACAGGGGCTATTGGGGGTATGGAACAAGAAAAGCAGAACCAT 598
BSNT_00118 476 CCTATGATCTGTTCGCAGTTGCCATGATTATGATCAACAGTGTGCATAAA 525
|||||||.|||||.||.||.||.|||||.||||||.||.|||..||.||.
RBAM_000770__ 599 CCTATGACCTGTTTGCTGTCGCAATGATCATGATCCACTGTGCCCAGAAG 648
BSNT_00118 526 AAAGAATTTAAGAAA---ACGAACCAGCCCAAAGAACAGCTTAGGTCTCT 572
|||||.|..|| ||| |.|| |||||.||||||||||||.|.|||.|
RBAM_000770__ 649 AAAGAGTGCAA-AAAGTCAGGA--CAGCCGAAAGAACAGCTTCGTTCTAT 695
BSNT_00118 573 CATCGAAGGAAACCCGCTGCTTCAAAAGTATAAAAAAGCGCTTTTTTCAG 622
|||.|||||..|||||.|.||..|.||||||||.||.|..||.|||||.|
RBAM_000770__ 696 CATTGAAGGCCACCCGTTTCTGAATAAGTATAAGAAGGTTCTGTTTTCTG 745
BSNT_00118 623 CCTTGAACGGAGATTATCAATCCGCAGATGAAATGAAAAAGGATATGCTA 672
|.||.|||||..|.||||..||.||.||.|..|||||..|.||.||.||
RBAM_000770__ 746 CTTTAAACGGCCAATATCCGTCTGCGGAAGCCATGAAGCATGACATCCT- 794
BSNT_00118 673 GAC-GCGGGGCAAAAAGC----AGCACAAAGAAAACAGCATATAAAAGCA 717
||| ||||||||.|..|| ||||.||.||||.|
RBAM_000770__ 795 GACTGCGGGGCAGAGCGCCGGGAGCAAAAGGAAAGC-------------- 830
BSNT_00118 718 TCACCGC--AGCCT-----GCCACACGACAAAGACAGCAAATACCGCGCC 760
|.|||| ||||| |||.|| |.|||| |||||..|
RBAM_000770__ 831 -CGCCGCCAAGCCTAAGCCGCCGCA----------ATCAAA-ACCGCAGC 868
BSNT_00118 761 AAAGAAAAATAACGAAGACGCGATATACCCCAAAACAGAAACCGGCTAAG 810
|..|.|...||.|..|.|||||.||||..||.|||||.|||||.||.|||
RBAM_000770__ 869 AGGGCACTGTATCTCAAACGCGGTATAAACCTAAACAAAAACCCGCAAAG 918
BSNT_00118 811 -----TCGGGGGGGTTATTTGAAACAACGCTGATCGTGATCAGTGTTTTA 855
| ||.||||||||||||||.||.||..|.|||||.|||.|.
RBAM_000770__ 919 CACAAT-----GGTTTATTTGAAACAACACTTATTTTAATCAGCGTTCTC 963
BSNT_00118 856 GCGCTTTATTTCGCCTATATTAT-TTTTTTCTTAATCTGA- 894
||.|||||||||||.||.||..| ||||||| |.|||| |
RBAM_000770__ 964 GCACTTTATTTCGCTTACATCGTCTTTTTTC-TCATCT-AG 1002
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