Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00118 and RBAM_000770

See DNA alignment / Visit BSNT_00118 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence pep-align/BSNT_00118.1.9828.seq
#    -bsequence pep-align/RBAM_000770___yabT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00118-RBAM_000770___yabT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00118-RBAM_000770___yabT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00118
# 2: RBAM_000770___yabT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity:     223/338 (66.0%)
# Similarity:   249/338 (73.7%)
# Gaps:          46/338 (13.6%)
# Score: 1152.5
# 
#
#=======================================

BSNT_00118         1 -----------------------------------------MYLAEASDG      9
                                                              :||||||.|
RBAM_000770__      1 MMNDALTSLACSLAPGTAIQGKWNGKSYRLLKQLGKGANGIVYLAEASGG     50

BSNT_00118        10 HVALKVSDDSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDTYIPGTNTKV     59
                     .||||:|.||:|:|||||||||||||:|.||||||||.||.:||..|..|
RBAM_000770__     51 QVALKISSDSMSVTSEVNVLKSFSKARSQTMGPSFFDADDAFIPQLNKNV    100

BSNT_00118        60 SFYAMEYIKGPLLLKYVSDKGGEWIPVLMIQLLSSLSVLHQQGWIFGDLK    109
                     |||.||||:||||.:|:|.||.|||||||:||||||||||||||:|||||
RBAM_000770__    101 SFYVMEYIEGPLLPQYISSKGAEWIPVLMVQLLSSLSVLHQQGWVFGDLK    150

BSNT_00118       110 PDNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYWGYGTRKAEPS    159
                     |||||||||||.|||||||||||:||||||||||||||||||||||||||
RBAM_000770__    151 PDNLIVTGPPAAIRCIDVGGTTKQGRAIKEYTEFYDRGYWGYGTRKAEPS    200

BSNT_00118       160 YDLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGNPLLQKYKKALFSAL    209
                     |||||||||||:...|||.||:.||||||||:|||:|.|.||||.|||||
RBAM_000770__    201 YDLFAVAMIMIHCAQKKECKKSGQPKEQLRSIIEGHPFLNKYKKVLFSAL    250

BSNT_00118       210 NGDYQSADEMKKDMLDAGQKAAQRKQHIKASPQPATRQRQQIPRQRKITK    259
                     ||.|.||:.||.|:|.|||.|.. |:...|.|:|.    |..|:|..:::
RBAM_000770__    251 NGQYPSAEAMKHDILTAGQSAGS-KRKAAAKPKPP----QSKPQQGTVSQ    295

BSNT_00118       260 TRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI    297
                     |||.|||||||..||||||||:|||||||||||:||||
RBAM_000770__    296 TRYKPKQKPAKHNGLFETTLILISVLALYFAYIVFFLI    333


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