Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00582 and RBAM_003520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence dna-align/BSNT_00582___nasC.1.9828.seq
# -bsequence dna-align/RBAM_003520___nasC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00582___nasC-RBAM_003520___nasC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00582___nasC-RBAM_003520___nasC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00582___nasC
# 2: RBAM_003520___nasC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2139
# Identity: 1751/2139 (81.9%)
# Similarity: 1751/2139 (81.9%)
# Gaps: 12/2139 ( 0.6%)
# Score: 7150.0
#
#
#=======================================
BSNT_00582___ 1 TTGACTGAA-CGACTGCTTAGATATTTCCGTGATAAACAGCAAGACGTCC 49
||||||||| ||| ||||..|.|||||||||||.||||.||||||..|.|
RBAM_003520__ 1 TTGACTGAACCGA-TGCTCCGTTATTTCCGTGACAAACTGCAAGATATTC 49
BSNT_00582___ 50 AATCAGAAAAAACATATGACACTCAATGCCCGTTTTGCAGCATGCAGTGC 99
||||.||||||||||||||.||.|||||||||||.|||||||||||.|||
RBAM_003520__ 50 AATCGGAAAAAACATATGAGACGCAATGCCCGTTCTGCAGCATGCAATGC 99
BSNT_00582___ 100 AAAATGCAGCTCGTGGAACAAACCATCGTCACGCGCAAAAAGTACACTGC 149
|||||||||||...||||||||||.|||...|.||.||.||.||||||||
RBAM_003520__ 100 AAAATGCAGCTTACGGAACAAACCTTCGCGGCACGGAAGAAATACACTGC 149
BSNT_00582___ 150 GATTGGGATTGATAATCCTACAACACAGGGTCGGCTATGCATGAAGGGCA 199
.||.||.|||||||||||.||.|||||.||.||..||||.|..||.||||
RBAM_003520__ 150 AATCGGCATTGATAATCCGACGACACATGGCCGTTTATGTACAAAAGGCA 199
BSNT_00582___ 200 TGAACGCCCACCAGCATGCCCTGAACTCCTCCCGCATCACCCGGCCGCTG 249
||||.|||||.|||||||||.||.||||.||||||||.||.||.||.|||
RBAM_003520__ 200 TGAATGCCCATCAGCATGCCGTGCACTCTTCCCGCATTACACGCCCCCTG 249
BSNT_00582___ 250 CTGAAGAAAAACGGCGAGTTTATGCCTGTTTCCTGGGAAGAAGCACTGAA 299
||.||.||||||||.||.|||.|||||||.||.||||..|||||||||||
RBAM_003520__ 250 CTTAAAAAAAACGGTGAATTTGTGCCTGTCTCTTGGGCTGAAGCACTGAA 299
BSNT_00582___ 300 TTACATTAAAGACCAAGTGACAA--TGATACAAGTAGAACACGGCCATGA 347
|..||||||.||.|||.| ||| ||||.|||...|||||||||.||||
RBAM_003520__ 300 TCGCATTAAGGAACAAAT--CAATCTGATCCAAACCGAACACGGCAATGA 347
BSNT_00582___ 348 CGCTATGGCGGTATACGGAAGCGCCTCGATTACAAATGAAGAGGCGTATT 397
.||.|||||.||.|||||.||||||||.||||||||||||||.||.|||.
RBAM_003520__ 348 TGCGATGGCTGTCTACGGGAGCGCCTCAATTACAAATGAAGAAGCCTATC 397
BSNT_00582___ 398 TGTTAGGGAAATTCGCACGGGTGGGCTTACAGACAAAATACATCGACTAC 447
||.|.||.||.|||||||||||.|||||||||||.|||||||||||.|||
RBAM_003520__ 398 TGCTTGGAAAGTTCGCACGGGTCGGCTTACAGACGAAATACATCGATTAC 447
BSNT_00582___ 448 AACGGGAGGCTTTGTATGTCCGCCGCAGCAACCGCAGCCAACCAAACATT 497
||||||.||||.||||||||.|||||||||||.||.|||..|||.|||||
RBAM_003520__ 448 AACGGGCGGCTCTGTATGTCTGCCGCAGCAACGGCGGCCGGCCAGACATT 497
BSNT_00582___ 498 CGGCGCGGACAGAGGCTTAACGAATCCCTTATCAGACATTCCCCACACCC 547
||||||||||||.|||.|.||||||||.|||||.|||||.||.||.||.|
RBAM_003520__ 498 CGGCGCGGACAGGGGCCTGACGAATCCATTATCGGACATCCCGCATACAC 547
BSNT_00582___ 548 GTGTGATCATTCTGGCCGGCACCAATATCGCGGAGTGCCAGCCTACGATT 597
||||.|||||.|||||.||||||||||||||.||.||||||||.|||||.
RBAM_003520__ 548 GTGTCATCATCCTGGCAGGCACCAATATCGCCGAATGCCAGCCGACGATC 597
BSNT_00582___ 598 ATGCCATATTTTGAAAAAGCGAAAGAAAACGGAGCTTACATCATTGCCAT 647
||||||||||||||.|||||||||||||||||.||||||||.||.|||||
RBAM_003520__ 598 ATGCCATATTTTGATAAAGCGAAAGAAAACGGGGCTTACATTATCGCCAT 647
BSNT_00582___ 648 TGATCCGCGTGAAACAGCGACAACAAAAATCGCCGATCTTCATTTGAAAA 697
||||||.||.|||||.|||||.||.|||||.|||||||||||..||||||
RBAM_003520__ 648 TGATCCCCGGGAAACGGCGACGACCAAAATAGCCGATCTTCACCTGAAAA 697
BSNT_00582___ 698 TCAAACCCGGCACAGACGCCGCCCTTGCCAACGGTCTCGTCAAAATCATC 747
||||.|||||.||||||||||||.|.||.|||||.||||||||||||..|
RBAM_003520__ 698 TCAAGCCCGGTACAGACGCCGCCTTGGCAAACGGACTCGTCAAAATCTGC 747
BSNT_00582___ 748 ATTGACGAACAGCTTATAAACGAGGATTTCATTCAATCACGAACAAATGG 797
||||||||||||||||.|.||.|.||.||.||.|...||||||||||.||
RBAM_003520__ 748 ATTGACGAACAGCTTACAGACAAAGACTTTATCCGCACACGAACAAACGG 797
BSNT_00582___ 798 ATTCGAAGAGCTGAAGCAGCATACTGACTCGTTGGACCTGAATGACATCG 847
||||.|..||||.||.|.|||||..|||.|.|||||.|||||.||.||..
RBAM_003520__ 798 ATTCAATAAGCTCAAACGGCATATCGACGCTTTGGATCTGAAAGAGATTT 847
BSNT_00582___ 848 CCGAACAGACGAGTGTCCCCCTGGCGGATATAAGAAAAGCGGCTGTAAAG 897
||||.|||||.|||||.||..|||.|.|||||.||||.||.||.||.|||
RBAM_003520__ 848 CCGAGCAGACAAGTGTTCCTTTGGAGCATATACGAAAGGCCGCCGTGAAG 897
BSNT_00582___ 898 TTTGCCAAGGAAACGTCCGGCATGCTGTTTACAGCCCGCGGGATTGAACA 947
||||||||||||||.||||||||||||||||||||.||.|||||.|||||
RBAM_003520__ 898 TTTGCCAAGGAAACATCCGGCATGCTGTTTACAGCGCGGGGGATCGAACA 947
BSNT_00582___ 948 GCAAACCGATGGAACAGCGGCTGTGAAAGGCTTCTTAAACATGGTGCTGA 997
|||.||.||.||.||.|||||.|||||||..||||||||.||||||||||
RBAM_003520__ 948 GCAGACTGACGGTACCGCGGCAGTGAAAGCTTTCTTAAATATGGTGCTGA 997
BSNT_00582___ 998 TCACAGGAAAAATCGGTACACCTTACTCAGGTTACGGGGCGATCACCGGA 1047
||||.|||||||||||.|..||.|.||||||||||||||||||.|||||.
RBAM_003520__ 998 TCACCGGAAAAATCGGCAAGCCCTTCTCAGGTTACGGGGCGATTACCGGT 1047
BSNT_00582___ 1048 CAAGGCAACGGGCAAGGTGCAAGAGAGCATGGCCAAAAAGCCGATCAGCT 1097
|||||||||||.|||||.||.|||||.||.|||||||||||.||||||||
RBAM_003520__ 1048 CAAGGCAACGGACAAGGCGCGAGAGAACACGGCCAAAAAGCGGATCAGCT 1097
BSNT_00582___ 1098 TCCGGGCTATCGATCTATTGAAAACGAACAACACCGGGCACATGTTGCGA 1147
|||||||||.||.|||||.||||..|||.||||||||||..||.||||||
RBAM_003520__ 1098 TCCGGGCTACCGTTCTATCGAAATTGAAGAACACCGGGCGTATATTGCGA 1147
BSNT_00582___ 1148 AAGTGTGGGGAATCCATCAGGATGATCTGCCGCGAAAAGGTGTCTCAGCC 1197
|.||||||||.||.|||||||||||.||||||||||||||.|||||||||
RBAM_003520__ 1148 AGGTGTGGGGGATTCATCAGGATGAGCTGCCGCGAAAAGGCGTCTCAGCC 1197
BSNT_00582___ 1198 TATGAAATGATGGAAAAAATCAATGACGGCGACATCAAAGGATTGTTCCT 1247
|||||||||||.||||||||..||..||||||||||||||||.||||.||
RBAM_003520__ 1198 TATGAAATGATAGAAAAAATAGATAGCGGCGACATCAAAGGACTGTTTCT 1247
BSNT_00582___ 1248 CATGTGCTCCAATCCCGCTGTCTCCAGCCCAAATGCGAATCTTGTGAAAA 1297
||||||.||||||||.|||||.|||.||||||||||||||.|.||.||..
RBAM_003520__ 1248 CATGTGTTCCAATCCGGCTGTTTCCGGCCCAAATGCGAATTTCGTCAAGC 1297
BSNT_00582___ 1298 AGGC-TTTACGTAAACTGACATTCTTTGTTGCAATCGATTTGTTTATTTC 1346
|||| .|.|.| |||||||.|||||||||.|||.|.|||||.||||||||
RBAM_003520__ 1298 AGGCAATCAAG-AAACTGAGATTCTTTGTCGCAGTTGATTTATTTATTTC 1346
BSNT_00582___ 1347 TGAGACTGCGAAATACGCAGATGTGATTTTACCCGCCTCCTCTTACTTAG 1396
||||||.|||..||.|||.||||||||||||||||||||||||||.||.|
RBAM_003520__ 1347 TGAGACCGCGGCATTCGCGGATGTGATTTTACCCGCCTCCTCTTATTTGG 1396
BSNT_00582___ 1397 AAGATGAAGGCACCATGACAAATGTAGAAGGACGCGTGACATTAAGAGAA 1446
||||.|||||.||.|||||||||||||||||.||||||||||||||||||
RBAM_003520__ 1397 AAGACGAAGGAACGATGACAAATGTAGAAGGCCGCGTGACATTAAGAGAA 1446
BSNT_00582___ 1447 ACAAGCCGGCCATGTCCCGGCGAAGCAAAGCATGATTGGCAGATCATTTG 1496
.|.|||||..|.||.|||||.|||||.||.|||||||||||||||||.||
RBAM_003520__ 1447 GCGAGCCGCACCTGCCCCGGAGAAGCGAAACATGATTGGCAGATCATCTG 1496
BSNT_00582___ 1497 TGATCTCGCATCCGCTCTCGGCAAGGGCCGCTACTTTTCTTATACGTCAG 1546
|||..|.||.||.|||||.||.||.||.|..||.|||.|.||||||||.|
RBAM_003520__ 1497 TGACATTGCCTCGGCTCTTGGTAAAGGGCATTATTTTCCCTATACGTCGG 1546
BSNT_00582___ 1547 CGGAGGATATTTTTGATGAATTGAGAGAAGCGAGCCGAGGCGGGATTGCC 1596
|||||||.||.|||.|.|||.||||||||||||||||.|||||.|||||.
RBAM_003520__ 1547 CGGAGGAAATCTTTAACGAACTGAGAGAAGCGAGCCGCGGCGGAATTGCT 1596
BSNT_00582___ 1597 GATTATTCAGGCATCTCATACGGCAGGCTCAGACGTGAAGGCGGCATTCA 1646
|||||.||.||||||.|.||.|.|||||||||.||.||||||||||||||
RBAM_003520__ 1597 GATTACTCTGGCATCACCTATGACAGGCTCAGGCGGGAAGGCGGCATTCA 1646
BSNT_00582___ 1647 TTGGCCGTGTCCGGAACCTGATCATCCCGGAATTGGACGCTTGTTTACAG 1696
.|||||.|||||.|||.|.|||||||||||||..||.||.|||||| .||
RBAM_003520__ 1647 GTGGCCATGTCCTGAAGCGGATCATCCCGGAACCGGGCGATTGTTT-GAG 1695
BSNT_00582___ 1697 -AATCATTTGCTCATCCGGATCAAAAAGCGGCATTAAGTGTGATTCCAAA 1745
|.||||||||.|||||.|||||.|.|||.|.||||||.|||||||||||
RBAM_003520__ 1696 CACTCATTTGCCCATCCCGATCACAGAGCTGAATTAAGCGTGATTCCAAA 1745
BSNT_00582___ 1746 CGAGCCACCTGTTCCAAAAGAGAAGCCGACAGCCGATTATCCGCTTTATT 1795
.||.||..|.||.||.||||||||.||||..||||..|||||||||||||
RBAM_003520__ 1746 TGAACCGGCCGTCCCGAAAGAGAAACCGAGCGCCGGCTATCCGCTTTATT 1795
BSNT_00582___ 1796 TAACAACAGGCAGAGTCATGTCTCACTACTTAACAGGCGTCCAAACAAGA 1845
||||.|||||.||.||.||||||||.||||||||.||.||.|||||.|||
RBAM_003520__ 1796 TAACCACAGGAAGGGTGATGTCTCATTACTTAACGGGTGTACAAACGAGA 1845
BSNT_00582___ 1846 AAAAGCGCCGCCCTTACCGCGAGACATTTTGAATCGTTTATCGAAATCCA 1895
||||||.|||||||..|.||.||||||||.|||||.|||.|.||||||||
RBAM_003520__ 1846 AAAAGCTCCGCCCTGGCTGCAAGACATTTCGAATCCTTTGTGGAAATCCA 1895
BSNT_00582___ 1896 TCCGCAAACAGCAGCAACCTACAATATCGAGGACCGTGTGCTGGTAAAAA 1945
|||..||||.||.||...|||..|||||||.||||||||.||.||.||||
RBAM_003520__ 1896 TCCAAAAACGGCGGCCGACTATCATATCGAAGACCGTGTTCTCGTGAAAA 1945
BSNT_00582___ 1946 TAGAATCGCCGCGGGGAAGCATCACCGTCCGCAGCAAATTATCAGAACAA 1995
|||||||.||.|||||.||||||||.|||||.||||.||..||.||..||
RBAM_003520__ 1946 TAGAATCCCCCCGGGGCAGCATCACGGTCCGGAGCAGATGGTCGGAGAAA 1995
BSNT_00582___ 1996 ATCAGAAAAGATACTGTT-TTTGTTCCCATCCATTGGGCAGACGCTCAAA 2044
.|..|||||||.|| ||| ||||||||||||||||||.|.|||.|.||||
RBAM_003520__ 1996 GTACGAAAAGACAC-GTTGTTTGTTCCCATCCATTGGTCTGACACGCAAA 2044
BSNT_00582___ 2045 ATGTGAATGATTTAATCGGGGAAGCCTTAGATCCAGCCTGTAAAATGCCC 2094
|.||.||.||||||||.||.||||||||.||.||.|.|||||||||||||
RBAM_003520__ 2045 ACGTCAACGATTTAATTGGTGAAGCCTTGGACCCGGACTGTAAAATGCCC 2094
BSNT_00582___ 2095 GGTTTTAAGGTATGCGCCGTCCGAATCAGACCTATTTAA 2133
|||||||||.|.||.||.||.||||||||.|||||.|||
RBAM_003520__ 2095 GGTTTTAAGATGTGTGCGGTACGAATCAGCCCTATATAA 2133
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